Pairwise Alignments

Query, 937 a.a., DNA polymerase I from Ralstonia sp. UNC404CL21Col

Subject, 922 a.a., DNA polymerase I (RefSeq) from Shewanella sp. ANA-3

 Score =  944 bits (2439), Expect = 0.0
 Identities = 492/939 (52%), Positives = 659/939 (70%), Gaps = 34/939 (3%)

Query: 8   LLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACIFDAKGKT 67
           L+LVDGSSYLYRAY+A P L N +G  TGA+YG+VNMLR L + Y   + A +FDAKGKT
Sbjct: 9   LVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAVVFDAKGKT 68

Query: 68  FRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVIEGVEADDVIGTLAERAARE 127
           FR+DLY  YK HR PMPDDLR+QIEP+H  +RALG P++ I GVEADDVIGT+A +A+RE
Sbjct: 69  FRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGTIARQASRE 128

Query: 128 GVRTIVSTGDKDLAQLVNDHVTLVNTMTNETLDPAGVQAKFGVPPERIVDYLSLIGDTVD 187
               ++STGDKD+AQLV++++TL+NTMT+  + P  V AK+GV P+RI+D+L+L+GD  D
Sbjct: 129 NRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFLALMGDKAD 188

Query: 188 NVPGVPKVGPKTAVKWLTEFGSLDNVIARAGEIKGV-------VGDNLRNTLEWLPKGRE 240
           N+PG+P VG KTA+  LT  GS+ N++A   ++  +       +   + +  + L    E
Sbjct: 189 NIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNADMLKLSYE 248

Query: 241 LLTVKLDCDLSKEVPTFDALIDGGEDKSKLVDFFSRYGFKTWLREASGDALPDTRSVGAA 300
           L T+K D +L ++   +  L     D+ +L+  +    FK WL E   +  P T    AA
Sbjct: 249 LATIKTDVELEQD---WHELTAKPADRDELIKCYGEMEFKRWLAEVLDNKAPATV---AA 302

Query: 301 RRAATPVKNYAGEAAQLQAQANLFDVEAPPDEIQYETVTTEAQLESWMQRLDEVDLVCID 360
           +   T  +  +  +  +              E QY+T+ TEAQL+ W+ +L +  L+ +D
Sbjct: 303 KAETTETQEESAPSVTI--------------ETQYDTILTEAQLDEWIAKLKQAPLMAVD 348

Query: 361 TETTSIDPMLAQLVGISLSVKPGEACYIPVAHRGPDVAGLDAAAQLSRDTVLARMKLWLE 420
           TETTS+D M+A+LVG+S +V+ G+A Y+P+AH   D  G  A  QL + T L +++  LE
Sbjct: 349 TETTSLDYMVAELVGLSFAVEAGKAAYLPLAH---DYVG--APQQLDKQTALEKLRPLLE 403

Query: 421 DESRKKVGQHLKYDAHVLANHGIALRGIEHDTMLESYVLESHRN-HGMDALAERVLHLKT 479
           D   KKVGQ+LKYD  VLAN GI L+G+  DTMLESYV  S  + H MD LA + L  K 
Sbjct: 404 DAKIKKVGQNLKYDISVLANAGIKLQGVVFDTMLESYVFNSIASRHDMDGLALKYLGHKN 463

Query: 480 ITYESVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRTLFPKVSEDDKLRYVYEQIE 539
           I +E + GKGA Q+ F+++PL+ A  YAAEDADITLRLH+ L+P++ ++ +L  V+  IE
Sbjct: 464 IAFEDIAGKGAKQLTFNQIPLETAAPYAAEDADITLRLHQHLWPRLEKETELASVFTDIE 523

Query: 540 MPTSIVLQKMERNGVLIDAERLAKQSNELGLRLIDLEAEAHKLAGQPFNLGSPKQIGDIF 599
           +P   +L  +ER GV ID+  L +QS+EL  ++ +LE +A+ +AG+ FNL SPKQ+  +F
Sbjct: 524 LPLIQILSDIERQGVFIDSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLF 583

Query: 600 FNQMKLPIIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNP 659
           F ++  P+IKKT  GAPST EEVL +LA D+PLPK++L++R L KLKSTYTDKLP MVN 
Sbjct: 584 FEKLGYPVIKKTPKGAPSTAEEVLVELALDFPLPKVILEHRSLTKLKSTYTDKLPLMVNA 643

Query: 660 RTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYSQIE 719
           +TGRVHT+Y QA A TGRL+S++PNLQNIP+RTEEGRRIR+AFIAP+G  I++ADYSQIE
Sbjct: 644 KTGRVHTSYHQANAATGRLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIE 703

Query: 720 LRIMAHLSQDEGLMRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYGMSA 779
           LRIMAHLSQD GL++AF EG+D+HRATAAEVF      VT +QRR AK +NFGLIYGMSA
Sbjct: 704 LRIMAHLSQDAGLLKAFAEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSA 763

Query: 780 FGLASNLGIGRDAAKLYIDRYFARYPGAASYMDETRQSARERGYVETVFGRRLWLPDING 839
           FGLA  L I R+ A+ YID YFARYPG   YM+ETR SA E GYV T+FGRRL+LP+I  
Sbjct: 764 FGLARQLDIPRNEAQTYIDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRD 823

Query: 840 GNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLEAEAM-RSRLVMQVHDELVLEVP 898
            N  RRQAAERAAINAPMQGTAAD+IK +M+++  W++ +      ++MQVHDELV EV 
Sbjct: 824 RNAMRRQAAERAAINAPMQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVD 883

Query: 899 QDELAVVRERLPELMCSVATLRVPLVAEVGVGANWEEAH 937
            D+   ++ ++ ELM   A L V L+AE G+G NW++AH
Sbjct: 884 ADKAETLKLKVCELMAKAANLDVELLAEAGIGDNWDQAH 922