Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 160 a.a., RNA polymerase subunit sigma from Pseudomonas fluorescens FW300-N2C3

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 22/145 (15%)

Query: 31  AALDIVQDAMIKLAEKYGDKPGAELPLLFQRILQNTIHDWFRRSKVRNTWVSLFSSFRTD 90
           AA D+V DA +++ E+  D P  +      R   N + D  RR+ +R             
Sbjct: 22  AAEDVVHDAYVRVLERASDTPIEQPRAFLYRTALNLVIDGHRRNVLRQV----------- 70

Query: 91  AEGDDTDPLELIESEAG--TTAAESSADKVERSQMLEILEREIEKLPTRQREAFLMRYWE 148
                 + L+++++E    T +  +S D     Q L++L+R + +L    RE+FL+R  E
Sbjct: 71  ------ESLDVLDNEERFFTPSPHTSLD---HGQRLDMLQRALAELSPLCRESFLLRKLE 121

Query: 149 DMDVAETAQAMGCSEGSVKTHCSRA 173
            +   + A+ +G S   V+ H   A
Sbjct: 122 GLSHPQIAERLGISRALVEKHIVNA 146