Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 182 a.a., RNA polymerase sigma-70 factor from Pseudomonas fluorescens FW300-N1B4

 Score = 45.8 bits (107), Expect = 4e-10
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 19/146 (13%)

Query: 34  DIVQDAMIKLAEKYGDKPGAELPLLFQRILQNTIHDWFRRSKVRNTWVSLFSSFRTDAEG 93
           DI  +  ++L E  G  P  E   L   I    I+  +RR                D E 
Sbjct: 39  DIAAETFVQLLESPGLTPIREPRALLTTIAHRLIYQLWRRR---------------DLER 83

Query: 94  DDTDPLELIESEAGTTAAESSADKVERSQMLEILEREIEKLPTRQREAFLMRYWEDMDVA 153
              D L  I+   G     S  D  + SQ L  L+R +E+LP + R AFL+   + +   
Sbjct: 84  QHLDQLSPIDPLGGP----SPEDLAQFSQTLTRLDRTLERLPGKVRAAFLLSRIDGLTYP 139

Query: 154 ETAQAMGCSEGSVKTHCSRATHALAQ 179
           + A  +G S+ SV  + +R+    AQ
Sbjct: 140 QIAAELGISQRSVSVYMTRSQALCAQ 165