Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 193 a.a., RNA polymerase, sigma-24 subunit, RpoE from Pseudomonas syringae pv. syringae B728a

 Score = 48.5 bits (114), Expect = 7e-11
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 12/158 (7%)

Query: 26  VRDDDAALDIVQDAMIKLAEKYGDKPGAELPLLFQRILQNTIHDWFRRSKVRNTWVSLFS 85
           V D   A D+ Q+A IK     G+  G            +  + W  R  +      L S
Sbjct: 41  VHDTHEAQDVAQEAFIKAYRALGNFRG-----------DSAFYTWLYRIAINTAKNYLVS 89

Query: 86  SFRTDAEGD-DTDPLELIESEAGTTAAESSADKVERSQMLEILEREIEKLPTRQREAFLM 144
             R   + D  ++  E  + + G    ES    + R ++   + R I+ LP   R A  +
Sbjct: 90  RGRRPPDSDVRSEDAEFYDGDHGLKDIESPERALLRDEIEGTVHRTIQLLPEDLRTALTL 149

Query: 145 RYWEDMDVAETAQAMGCSEGSVKTHCSRATHALAQALR 182
           R ++ +   + A  M C  G+V++   RA  A+ +AL+
Sbjct: 150 REFDGLSYEDIASVMQCPVGTVRSRIFRAREAIDKALQ 187