Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 187 a.a., RNA polymerase sigma70 factor from Burkholderia phytofirmans PsJN

 Score =  279 bits (713), Expect = 2e-80
 Identities = 137/188 (72%), Positives = 164/188 (87%), Gaps = 1/188 (0%)

Query: 1   MASEQELSAFLLSVEKRAFKQAVFAVRDDDAALDIVQDAMIKLAEKYGDKPGAELPLLFQ 60
           MAS++EL+ FL  VE+RAFKQ V+AVRDDDA+LDIVQDAMIKLAEKYGD+P AELPLLFQ
Sbjct: 1   MASDKELADFLAGVERRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGDRPAAELPLLFQ 60

Query: 61  RILQNTIHDWFRRSKVRNTWVSLFSSFRTDAEGDDTDPLELIESEAGTTAAESSADKVER 120
           RILQN +HD+FRR+KVRNTWVSLFSS   +A+ +D DPLE  E++ G+  +ES+  K+ER
Sbjct: 61  RILQNAMHDYFRRAKVRNTWVSLFSSL-GNADDEDFDPLETFEAQQGSAGSESNEQKLER 119

Query: 121 SQMLEILEREIEKLPTRQREAFLMRYWEDMDVAETAQAMGCSEGSVKTHCSRATHALAQA 180
            Q+L++++ EI+KLP RQREAFLMRYWEDMDVAETA AMGCSEGSVKTHCSRATH LAQA
Sbjct: 120 EQVLQLIDDEIQKLPARQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLAQA 179

Query: 181 LRARGIRL 188
           L+A+GI L
Sbjct: 180 LKAKGITL 187