Pairwise Alignments

Query, 456 a.a., DNA repair protein RadA from Ralstonia sp. UNC404CL21Col

Subject, 478 a.a., DNA repair protein RadA from Synechococcus elongatus PCC 7942

 Score =  436 bits (1120), Expect = e-126
 Identities = 235/466 (50%), Positives = 308/466 (66%), Gaps = 20/466 (4%)

Query: 1   MAKSKTVYTCTECGGTAPKWAGQCPNCQQWNTLVETVAQPTSGAGA--------RFQSLA 52
           MA+S++ Y C  CG  AP++ G+CP C+ WN+LVE    PT+            R   LA
Sbjct: 1   MARSRSEYVCQNCGHRAPRYVGRCPACESWNSLVEEAIAPTAKTAIATVLPSRQRRDRLA 60

Query: 53  SS----ATVRKLSDIDAVDVPRFSSGIDEFDRVLGGGLVSGGVVLIGGDPGIGKSTLLLQ 108
            +       + LS I  V   R +SG  EFDRVLGGGLV G +VLIGGDPGIGKSTLLLQ
Sbjct: 61  EAPPQAVAAQPLSAIADVSQQRIASGSGEFDRVLGGGLVPGSLVLIGGDPGIGKSTLLLQ 120

Query: 109 ALSNLSTDRRVLYVSGEESGSQIALRARRLGIE-SPNLA-----LLAEIQLERIQATIEA 162
             + LS  + +LYV  EESG Q+ LR +R+    SPN A     LL EI L+ I A +E 
Sbjct: 121 TATALSQQQPILYVCAEESGQQVKLRWQRIAAHRSPNQADQQFYLLPEIDLDAIVAELET 180

Query: 163 EKPEVVVIDSIQTLYSEALTSAPGSVAQVRECAAQLTRIAKRLDVTTILVGHVTKEGALA 222
            +P V +IDSIQ LYS AL SAPGSVAQVREC A L R+AK+L +T ++VGHVTK+GA+A
Sbjct: 181 LRPPVAIIDSIQALYSPALGSAPGSVAQVRECTAALMRVAKQLTITLLIVGHVTKDGAIA 240

Query: 223 GPRVLEHIVDTVLYFEGDTHSAYRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFL 282
           GP+VLEH+VDTVLYFEGD  +++RL+R+ KNRFGA  ELG+F M +RGL  V NPSALFL
Sbjct: 241 GPKVLEHLVDTVLYFEGDRFASHRLLRSVKNRFGASQELGIFEMVDRGLEEVGNPSALFL 300

Query: 283 SQHEQVVPGSCVLVTQEGTRPLLVEIQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRH 342
              +Q   G+  +V  EGTRPLLVE+QALV  ++  +PRR   G+E NRL  +LAVL + 
Sbjct: 301 GSRDQATSGTATIVACEGTRPLLVELQALVSPSSYSSPRRAGTGIEYNRLLQILAVLEKR 360

Query: 343 AGIACFDQDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKALPRGLVVFGEIGLAGEIRP 402
            G+     D ++ + GG+ + EPAADL + +A+ +S R++ L    V+ GEIGL G++RP
Sbjct: 361 LGLPLSKFDAYVASAGGLNVAEPAADLGIAIALVASFRDRCLRPDTVLIGEIGLGGQVRP 420

Query: 403 TPRGQERLKEAAKLGFSIAVIPKSNVPKQAIDGLEVIAVERIEQAI 448
             + + RLKEAAKLGF  A++PK    ++    LE++ V R+  AI
Sbjct: 421 VSQVELRLKEAAKLGFQRALLPKGQ--ERCESDLELVPVSRLVDAI 464