Pairwise Alignments

Query, 456 a.a., DNA repair protein RadA from Ralstonia sp. UNC404CL21Col

Subject, 458 a.a., DNA repair protein RadA from Pedobacter sp. GW460-11-11-14-LB5

 Score =  410 bits (1054), Expect = e-119
 Identities = 221/458 (48%), Positives = 298/458 (65%), Gaps = 9/458 (1%)

Query: 1   MAKSKTVYTCTECGGTAPKWAGQCPNCQQWNTLVETVAQPTSGAGARFQSLASSATVRKL 60
           MAKSK+ + C  CG  + KW G+CP+C QWNT VE + + +S A   ++S  SS  + K 
Sbjct: 1   MAKSKSAFFCQSCGYESAKWLGKCPSCNQWNTFVEEIVEKSSAAVPTWKSDTSSRKLSKP 60

Query: 61  SDIDAVDVP---RFSSGIDEFDRVLGGGLVSGGVVLIGGDPGIGKSTLLLQALSNLSTDR 117
           S +D +      R  +G  E DRVLGGGLV G +VLIGG+PGIGKSTL+LQ   NL   +
Sbjct: 61  SKVDEIQSSTERRILTGDKELDRVLGGGLVEGSLVLIGGEPGIGKSTLMLQLALNLK-GK 119

Query: 118 RVLYVSGEESGSQIALRARRLGIESP--NLALLAEIQLERIQATIEAEKPEVVVIDSIQT 175
           ++LY+SGEES  QI +RA R+  ESP  N  +L E   + I   IE  +PE++V+DSIQT
Sbjct: 120 KLLYISGEESEQQIKMRAERIQ-ESPSSNCYILTETSTQNIFKQIEILEPEILVVDSIQT 178

Query: 176 LYSEALTSAPGSVAQVRECAAQLTRIAKRLDVTTILVGHVTKEGALAGPRVLEHIVDTVL 235
           L+S  + S PGSV+QVREC A+L R AK   V   L+GH+TK+GA+AGP++LEH+VDTVL
Sbjct: 179 LHSAHIDSTPGSVSQVRECTAELLRFAKETGVPVFLIGHITKDGAIAGPKILEHMVDTVL 238

Query: 236 YFEGDTHSAYRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCVL 295
            FEGD H  YR++R+ KNRFGA  ELG++ M   GLR V+NPS + LSQ ++ + G  + 
Sbjct: 239 QFEGDRHHVYRILRSIKNRFGAAAELGIYEMQGSGLREVSNPSEILLSQRDEELSGIAIA 298

Query: 296 VTQEGTRPLLVEIQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLN 355
            T EG RP+L+E QALV +A    P+R A G +  R+ MLLAVL +  G     QDVFLN
Sbjct: 299 ATLEGARPMLIETQALVSSAAYGTPQRSATGFDTKRMNMLLAVLEKRCGFRLSTQDVFLN 358

Query: 356 AVGGVKITEPAADLAVLLAIHSSMRNKALPRGLVVFGEIGLAGEIRPTPRGQERLKEAAK 415
             GG+++ +PA DLA+L+AI SS ++ A+        E+GL+GEIR   R ++R+ EA K
Sbjct: 359 IAGGIRVEDPAIDLAILIAIISSHQDIAVSSKNCFAAEVGLSGEIRAVNRIEQRIAEADK 418

Query: 416 LGFSIAVIPKSNVPKQAID--GLEVIAVERIEQAIDRV 451
           LGF    I K N+   A +   LE+ AV +IE+    V
Sbjct: 419 LGFETIYISKYNLKGIATEKYNLEIKAVSKIEEVFSLV 456