Pairwise Alignments

Query, 456 a.a., DNA repair protein RadA from Ralstonia sp. UNC404CL21Col

Subject, 499 a.a., DNA repair protein RadA from Bifidobacterium breve UCC2003

 Score =  370 bits (949), Expect = e-107
 Identities = 203/493 (41%), Positives = 289/493 (58%), Gaps = 46/493 (9%)

Query: 1   MAKSKTVYTCTECGGTAPKWAGQCPNCQQWNTLVET-VAQPTSGAG-------ARFQSLA 52
           MAKS   Y C+ECG   PKW G+CP C QW T+ E   A+P +G+        +R +S A
Sbjct: 1   MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAA 60

Query: 53  ----SSATVRKLSDIDAVDVPRFSSGIDEFDRVLGGGLVSGGVVLIGGDPGIGKSTLLLQ 108
               + A  + +++I    V R  +G  EFDRVLGGG+V G V LI G+PGIGKSTLLLQ
Sbjct: 61  VPDTARAAAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ 120

Query: 109 ALSNLSTD---------------------------RRVLYVSGEESGSQIALRARRLGIE 141
              N++                               VLY+SGEES +Q+ LRA R+   
Sbjct: 121 TAGNIARTVAEGQTINAAGRGQSSHRPSGLASTRAHTVLYISGEESQAQVRLRATRINAV 180

Query: 142 SPNLALLAEIQLERIQATIEAEKPEVVVIDSIQTLYSEALTSAPGSVAQVRECAAQLTRI 201
            PNL L A   L  +   IE  KP + ++DS QT+ S+ +    G   QVRE A+ L   
Sbjct: 181 EPNLLLAATTDLATVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDT 240

Query: 202 AKRLDVTTILVGHVTKEGALAGPRVLEHIVDTVLYFEGDTHSAYRLVRAFKNRFGAVNEL 261
           AK LD+   LVGHVTK+G++AGPR LEH+VD V  FEGD+ +A R++RA KNRFG  +E+
Sbjct: 241 AKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAAKNRFGPTDEV 300

Query: 262 GVFAMTERGLRGVANPSALFL------SQHEQVVPGSCVLVTQEGTRPLLVEIQALVDTA 315
           G F M+  G+  V +P+ LFL      S ++  V G+CV  T +G R L +E+QALV  +
Sbjct: 301 GCFDMSGEGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQALVTNS 360

Query: 316 NVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLAI 375
            +P PRR   G++ +R+AML+AVL+RH+ +     D++++ + G +  EP +DLA++ A+
Sbjct: 361 VLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVGAL 420

Query: 376 HSSMRNKALPRGLVVFGEIGLAGEIRPTPRGQERLKEAAKLGFSIAVIPKSNVPKQAIDG 435
            S+  +K + R     GEI L G++RP PR + RL+EAA+LGF+ AVIP    P   +DG
Sbjct: 421 ASAATSKPIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVH-VDG 479

Query: 436 LEVIAVERIEQAI 448
           L+++    +  A+
Sbjct: 480 LKLVEASTLADAL 492