Pairwise Alignments

Query, 447 a.a., ribosome biogenesis GTPase Der from Ralstonia sp. UNC404CL21Col

Subject, 500 a.a., Small GTP-binding protein domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  287 bits (734), Expect = 6e-82
 Identities = 180/496 (36%), Positives = 255/496 (51%), Gaps = 58/496 (11%)

Query: 5   IALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGFEPVA 64
           +A++GRPNVGKSTLFNRL   R A+V D+PG+TRDR  G+  + D  F  +DT G E   
Sbjct: 4   VAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLEEAG 63

Query: 65  KEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGM 124
            E +   M +QT +A+ EA V + ++D R G+ P D   A+ LRK    ++L  NK EG 
Sbjct: 64  PEVLEGRMRQQTDRALSEAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKCEGG 123

Query: 125 RYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL------------------------ 160
                  + Y +GLGDP  +SA HG+G++ L+ EAL                        
Sbjct: 124 AGKPGFYESYSMGLGDPVPLSAEHGEGLS-LLYEALMPIYDAHMAQEAKDEADAVRAAFL 182

Query: 161 ------------DLAFAERPELAEAADAH------------------DHGTRIAIVGRPN 190
                       D A  E  E+ E  D+                   +   ++AI+GRPN
Sbjct: 183 ETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERPIQMAIIGRPN 242

Query: 191 VGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEK 250
            GKSTL+N LIG++R++     G TRDAI VD+E  G+ + L+DTAGLR++ +V  ++EK
Sbjct: 243 TGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRRKARVENSLEK 302

Query: 251 FSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLTGH--A 308
             V  TL +I  A V VL+LDA   +  QD  IA  +++ GRALVI VNKWD       A
Sbjct: 303 LMVADTLNAIRLAEVCVLMLDANMVMDRQDLTIARLVIDEGRALVIAVNKWDACADRKAA 362

Query: 309 RDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLME 368
             R+   +E  L  +       +SA E  G+  LM +   A+A    ++PT +  R L  
Sbjct: 363 LQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAALEAHAKWNRRVPTSRFNRWLKG 422

Query: 369 AVE-YQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRYLEGRFREAFQLK 427
            ++ +  P      R ++RY  Q    PP   +      ++PE+Y RYL    RE F + 
Sbjct: 423 MIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPESYVRYLNSGLREDFDMA 482

Query: 428 GTPLRIEFRTNKNPYA 443
           GTP+R+ FR  KNPYA
Sbjct: 483 GTPIRLLFRATKNPYA 498