Pairwise Alignments

Query, 696 a.a., excinuclease ABC subunit UvrB from Ralstonia sp. UNC404CL21Col

Subject, 725 a.a., excinuclease ABC, B subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  764 bits (1973), Expect = 0.0
 Identities = 389/661 (58%), Positives = 485/661 (73%), Gaps = 4/661 (0%)

Query: 21  GSPFQLYQPYPPAGDQPEAIRQLVENIEDGLSYQTLLGVTGSGKTFTMANVIAQVGRPAI 80
           G  F++   + PAGDQP AI +L E + +G   Q LLG TG+GKTFTMA VI Q  RPAI
Sbjct: 22  GRMFRMATSFEPAGDQPTAIAELSEGVRNGERDQVLLGATGTGKTFTMAKVIEQTQRPAI 81

Query: 81  VFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQ 140
           + APNKTLAAQLY EF+ FFP NAVEYFVSYYDYYQPEAYVP+ D +IEK+S INE I++
Sbjct: 82  ILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESQINEQIDR 141

Query: 141 MRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHQMILTLRAGDKVSQRDVIARLIAMQY 200
           MR SAT++LLER DV+IVA+VS IYGIG+   Y  M   L AG    QR ++A L+A QY
Sbjct: 142 MRHSATRALLERDDVIIVASVSCIYGIGSVETYEAMTQDLVAGQSYDQRQIMADLVAQQY 201

Query: 201 TRNETDFQRGTFRVRGDTVDIFPAEHAEMAVRLELFDDEVESLQLFDPLTGRVRQKIPRF 260
            RN+  FQRG+FRVRGD+++I+PA   + A++   F +E+ES+  FDPLTG     + R 
Sbjct: 202 RRNDAGFQRGSFRVRGDSLEIWPAHMEDRALKFSFFGEELESITEFDPLTGEKADTLDRI 261

Query: 261 TVYPSSHYVTPRETVLRAIETIKAELRERLDFFYKENKLVEAQRLEQRTRFDLEMLQELG 320
            +Y +SHYVTPR T+ +AI +IK ELR RLD    E KL+EAQRLEQRT FD+EML+  G
Sbjct: 262 RIYANSHYVTPRPTLQQAIVSIKKELRIRLDQLVAEGKLLEAQRLEQRTNFDIEMLEATG 321

Query: 321 FCKGIENYSRHLSGSAPGEPPPTLVDYLPPDALMFLDESHVLIGQLNGMYNGDRARKETL 380
            C GIENYSR+L+G APGEPPPTL +Y+P +A++F DESHV + Q+ GMY GD  RK TL
Sbjct: 322 VCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQIGGMYKGDFRRKMTL 381

Query: 381 AEYGFRLPSALDNRPLKFAEFETKMRQVTFVSATPGDYEKKTAGTEVVEQVVRPTGLVDP 440
           AE+GFRLPS +DNRPLKF E++    Q  FVSATP  +E + AG    EQV+RPTGL+DP
Sbjct: 382 AEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWELEQAGGVFTEQVIRPTGLLDP 441

Query: 441 IIEVRPATTQVDDLLSEIHVRVEAGERVLVTTLTKRMAEQLTEFLSENGIKVRYLHSDID 500
            +E+RP   QVDDLL E+      G R LVTTLTKRMAE LTE++ E GIKVRY+HSDID
Sbjct: 442 QVEIRPVEMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDID 501

Query: 501 TVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR 560
           T+ER+EI+RDLRLG FDVL+GINLLREGLDIPE  LVAILDADKEGFLR+E SL+QTIGR
Sbjct: 502 TLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGR 561

Query: 561 AARNVNGTAILYADRMTDSMKKAIDETERRRAKQIAHNEAHGITPRGVVKRIKDIIDGVY 620
           AARN  G  I+YADR+T SM++A+ ET RRRAKQIA+NE HGITP  V K ++D++ G+Y
Sbjct: 562 AARNAEGRVIMYADRITGSMERALAETNRRRAKQIAYNEEHGITPETVKKNVEDVMAGLY 621

Query: 621 NVDDARAELKAAQEAAKYEDMSEKQASKEIKRLEKQMLDHAKNLEFEKAAAVRDQLAKLK 680
             D     + A  E    + +        ++ L   M   A+NLEFE+AA +RD++ +L+
Sbjct: 622 QGDVDMNRVTAKVE----KPLHGGNLETVLEGLRADMRKAAENLEFEEAARLRDEVKRLE 677

Query: 681 S 681
           +
Sbjct: 678 A 678