Pairwise Alignments

Query, 568 a.a., long-chain fatty acid--CoA ligase from Ralstonia sp. UNC404CL21Col

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  274 bits (700), Expect = 8e-78
 Identities = 185/563 (32%), Positives = 289/563 (51%), Gaps = 27/563 (4%)

Query: 7   QFWPRRLPHNI-----SSPQTSLWYNLEVSARRYPDKDAVIFYGRHTTFQELHDDAVAVA 61
           Q W + LPH++     +   +SL    E S  +Y D+ A +  G   T+++L + + A A
Sbjct: 3   QLWTKNLPHDVPAIIDAKQYSSLIDLFESSVAKYADQPAFVNMGATLTYRKLEERSRAFA 62

Query: 62  GWLQQVAGVQKGDRVLLYMQNCPQFMAAYYGILRADAVVVPVNPMNRPEEFKHYVTDAGA 121
            +LQ    +QKGDRV + M N  Q+  A +GILRA  VVV VNP+  P E KH + D+GA
Sbjct: 63  AYLQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGA 122

Query: 122 ATVICSADLAANVTTANAELPEAQRTRHLLVTSYADALPATYDYPEDAPPAWITAQHPAQ 181
             ++    + +N      ++ E    + +++T   D L A      +    +I    P  
Sbjct: 123 KAIV----VVSNFANTLEQVVEQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKY 178

Query: 182 --PGAVAWNDVLA--QRLVPGPHTAGPDDLAVMPYTSGTTGFPKGCMHPHRTVMHNIV-G 236
             P A++    L+  +RL     T   DD+A + YT GTTG  KG M  H  ++ N++  
Sbjct: 179 HLPHAISMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQA 238

Query: 237 GSMWSNGTKEGVS--LSIIPLFHVTGMQYGMNAPIYMGSTVVML--PRWDREVAGRLISR 292
            + +S    +G    ++ +PL+H+  +       ++ G+  +++  PR D       + +
Sbjct: 239 DAAYSPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPR-DIPAFVSELKK 297

Query: 293 YKITHWTNIPTMVIDFLASPQLAEFDLSSLAYIGGGGAAMPQAVAERLLKDFNLAYQEGY 352
           +  T  T + T+    ++S +    D S+L    GGG A+ +AVA++          EGY
Sbjct: 298 HPFTALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGY 357

Query: 353 GLSETIAPTHSNPAD-RAKQQCLGIPVFNTDARIVDPQTLKELPPGEVGEIIVSGPQVFL 411
           GL+E        P +       +G PV NTD ++ D +    LP GE GE+   GPQV  
Sbjct: 358 GLTEASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEG-NVLPQGETGELFAKGPQVMK 416

Query: 412 GYWGKPQATAEVFIEFEGKKFFRTGDLGKMDEEGYFFLTDRLKRMINASGFKVWPAEVES 471
           GYW +P+ TA+V I+ +G  +  TGD+G MDE+G+FF+ DR K MI  SGF V+P EVE 
Sbjct: 417 GYWQRPEETAKV-IDKDG--YLATGDIGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEE 473

Query: 472 LLYKHPDVQEACIIGTRDAYRGESVKAVVVLKAHAKGKTTEDDIINWARDNMAAYKYPRV 531
           ++  HP V E   +G      GE VK  VV K  +    TE+ +I   R ++  YK P++
Sbjct: 474 VVALHPKVLEVAAVGVPHEVSGELVKVFVVPKDKS---LTEEQVIKHCRHHLTGYKIPKL 530

Query: 532 VEFVDALPKSGTGKVMWRTLQEQ 554
           VEF D LPKS  GK++ R L+++
Sbjct: 531 VEFRDELPKSNVGKILRRELRDE 553