Pairwise Alignments

Query, 247 a.a., cytochrome c1 from Ralstonia sp. UNC404CL21Col

Subject, 231 a.a., ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 2e-55
 Identities = 109/247 (44%), Positives = 147/247 (59%), Gaps = 18/247 (7%)

Query: 1   MKKLLAIFALAGLVFAAPVMANEGGVPLDPAPNQSSDTSALQRGAKLFVNYCLNCHGASA 60
           MKKLL   AL  L+    + A  G V L+ A     D ++L+RG  LF +YC  CH    
Sbjct: 1   MKKLL--IALVTLLPTLAIAAG-GQVHLEDANVDLHDKASLERGLGLFQHYCSGCHSTQY 57

Query: 61  MRYNRL-RDIGLSEEQIKQNLLFSSDKVGDTMHIAMDREDAKKWFGAVPPDLSVIARARG 119
            RY R+  D+G+S + ++   +F+  K+G+ M  A+  +DA KWFGA PPDL+++AR RG
Sbjct: 58  QRYERVANDLGISADDMRNKYMFTDAKIGELMQNAIPPKDAAKWFGATPPDLTLVARVRG 117

Query: 120 SDWLYTYLRTFYRDDTRPTGWNNLVFDKVGMPHVLWELQGQQVPKYAEVKSEHGEAEKKL 179
            DW+Y+YL+ FY+D +RP G NN VF  VGMPHVL ELQG        VK E G      
Sbjct: 118 EDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQG------TPVKQEDGTI---- 167

Query: 180 VGFEVSVPGKMNKVEYDQAVADLVSYLDWMAEPAGNLRKRLGVWVLLFIGVFFVLAWRLN 239
               V   GK+N  EYDQAV D+  +L + AEP    R+ LG WVL F+ +FF++A+ L 
Sbjct: 168 ----VVSGGKLNAEEYDQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLK 223

Query: 240 AAYWKDI 246
             YWKD+
Sbjct: 224 KEYWKDV 230