Pairwise Alignments

Query, 715 a.a., ATP-dependent DNA helicase RecG from Ralstonia sp. UNC404CL21Col

Subject, 698 a.a., ATP-dependent DNA helicase recG (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  423 bits (1087), Expect = e-122
 Identities = 268/675 (39%), Positives = 381/675 (56%), Gaps = 42/675 (6%)

Query: 37  KLGLHRDVDLVLHLPMRYEDETTLLTIAEATARANTGWAAQVEGTVTRNEVAFRPR-RQL 95
           +L ++   DL+ + P +Y D + +  I E           Q++G +   E     R R+L
Sbjct: 26  ELEIYSLYDLIYYFPYKYVDRSRIYYIHEIDGNMPY---IQLKGEILGFETIGEGRQRRL 82

Query: 96  VVHIADDSGELVLRFLNFYGSQVKQMAEGVRLRVRGEVRGG---FFGA-EMVHPTVRAVA 151
             H +D +G  ++  + F G  +K +    +L     + G    F G   + HP +    
Sbjct: 83  TAHFSDGTG--IVDLVWFQG--IKYILGKYKLHEEYIIFGKPTVFNGRINVAHPDIDKPD 138

Query: 152 DDEPLPDRLTPVYPSTAGVAQAYLRKAILNALTRT-------PLPETLPNSLITGPLAPL 204
           D +     L P Y +T  + +++L    +  +  T       PLPETL   +    L+  
Sbjct: 139 DLKLSSVGLQPYYNTTEKMKRSFLNSHAIEKMMATVIQQIQEPLPETLSPKI----LSDH 194

Query: 205 KLMTPADAVRLLHQPT-PDVDEHSLVERTHPAWLRIKFDELLSQQLSLKRAQAARRMRNA 263
            LM   +A+R +H PT PD            A  R+KF+EL   QL++      R+ R  
Sbjct: 195 HLMPLTEALRNIHFPTNPD--------SLRRAQYRLKFEELFYVQLNILCYAKDRQRRYR 246

Query: 264 PVLRDSGKEGLLARFMNALPFKLTGAQARVWEEIRADLAHPYPMQRLLQGDVGSGKTVIA 323
             + +   +     +   LPF+LTGAQ RV +EIR D+     M RLLQGDVGSGKT++A
Sbjct: 247 GYIFERVGDVFNTFYSQNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVA 306

Query: 324 ALAACQAIDAGWQAALMAPTELLAEQHYRKLSAWLEPLGVDIVWLAGSLKRKQKDEAAAR 383
            ++   A+D G+QA +MAPTE+LA QHY  +   L  + + +  L GS+K K+++     
Sbjct: 307 LMSMLLALDNGFQACMMAPTEILANQHYETIKELLFGMDIRVELLTGSIKGKKREAILTG 366

Query: 384 VAAGTAQLVIGTHALIQDAVTFARLGLAVVDEQHRFGVAQRLALRGKASNGDAPAANAQV 443
           +  G  +++IGTHA+I+D V F+ LGL V+DEQHRFGVAQR  L  K         N Q 
Sbjct: 367 LLTGDVKILIGTHAVIEDTVNFSSLGLVVIDEQHRFGVAQRARLWTK---------NIQP 417

Query: 444 PHQLMMSATPIPRTLAMTYYADLDVSAIDELPPGRTPIVTRLVNDARRDEVIERIYAAAR 503
           PH L+M+ATPIPRTLAMT Y DLDVS IDELPPGR PI T    D RR+ +   +     
Sbjct: 418 PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITTIHQFDNRRESMYRAVRKQIE 477

Query: 504 EGRQVYWVCPLIEESEALQLQTAVETFETLSQSLQGLKVGLVHGRLPSAEKAAVMSAFAG 563
           EGRQVY V PLI+ESE + L+   E ++ + +   G  V  VHG++ SAEK   M  F  
Sbjct: 478 EGRQVYIVYPLIKESEKIDLKNLEEGYQHILEEFPGCTVAKVHGKMKSAEKDEQMQLFIS 537

Query: 564 GDLHVLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAESVCVLLYQAP 623
           G   ++VATTVIEVGV+VPNAS+M+IE+AERFGL+QLHQLRGRVGRG  +S C+L+    
Sbjct: 538 GQAQIMVATTVIEVGVNVPNASVMIIENAERFGLSQLHQLRGRVGRGAEQSYCILVTNYK 597

Query: 624 LSPTAKQRLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGEAM-LRFADLNHDAWLVEF 682
           L+   ++RL+ M  T DGFEIA  DL++RGPG+  G +QSG A  L+ A+L  D  L+++
Sbjct: 598 LTEDTRKRLEIMVRTNDGFEIAEADLKLRGPGDLEGTQQSGIAFDLKIANLARDGQLLQY 657

Query: 683 AQGAADAMLARFPEA 697
            +  A+ ++   P A
Sbjct: 658 VRSIAEDIVDNDPSA 672