Pairwise Alignments

Query, 1089 a.a., PilC/PilY family type IV pilus protein from Ralstonia sp. UNC404CL21Col

Subject, 1182 a.a., type IV pilin biogenesis protein, putative (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (398), Expect = 3e-42
 Identities = 220/889 (24%), Positives = 346/889 (38%), Gaps = 246/889 (27%)

Query: 178  SGTSYTSANPINNPCQRNYVIYIGNAVNNGKPQDTGKNIQSDLASALGLSANTTPPQIVI 237
            +G +YT+  P        Y+IYI     +G P     N  S + S    + NT       
Sbjct: 378  TGGNYTT--PFKKCPDTAYIIYI----TDGAPT-IDSNADSAIISLASSAENT------- 423

Query: 238  PSPYNKYQA--NWGDE-------WAQFMYRYDLQ--TKTIPKDHPPQNIITYTISVTDGN 286
             + Y+ +    +WGD         A +MY  D+    K        QN+  +TI  ++G 
Sbjct: 424  -ANYSGFDFVNSWGDTETSYLPALAAYMYNNDMVKGVKDANGIDNKQNVRLFTIGFSEGA 482

Query: 287  NPDYVAFDQSMATNGGGKA--------YVAQLG------KPDQLKDILLQIFNEIQAVNS 332
            +      +++    G  +         YVA+ G        D LK IL        +++S
Sbjct: 483  DVAAKLLEEAAFRGGNPRDDSGVSKGYYVAKNGLDLVAAMDDALKSIL--------SIDS 534

Query: 333  VFASVSLPAAVNAQGQFLNQVYVGMFRPDASAAPRWMGNLKQYQVGYDANGTLQLLDSVG 392
             F S S+ +    + Q  N  Y  MF P     PRW GNLK+ +V  +++G +     VG
Sbjct: 535  SFTSPSIASNNFDKTQTYNSAYFAMFLP--GKGPRWSGNLKKLKV--NSSGEI-----VG 585

Query: 393  KPALSSA--GTGFISPNAVSFWSADPPLAFGTSGYGSGVTNWPKNGFWINSPSGVGGASD 450
                S A    G I+ +  ++W+  P                                ++
Sbjct: 586  PGGSSKAIDSNGNIAASTCTYWNTCP--------------------------------AN 613

Query: 451  SPDGEVVEKGGAGEMLRAQFLTDQSTRVLYTCNGVGTCPTSGAMPTFDTSNTWLTGGAGK 510
            + DG  V  GG   +LR+  L  ++ R     + VG                        
Sbjct: 614  NIDGNKVNSGGVLPILRST-LKSRNIRTNVGTSIVGI----------------------- 649

Query: 511  GLDAINSYNSVNGAPAITSSEQNYFINWVRGRDVYAMDGSTKAPTVGQEAETGPGSPVTI 570
                       +G  +  S E    ++W+ G DV              + +   G+    
Sbjct: 650  ---------QFSGFASAYSQED---LDWLYGVDV--------------DDDDNDGNIYDA 683

Query: 571  RPSIHGDVLHSRPVVINYGTSTAPN--------VVVYYGTNDGVFHAVNGNQATGIKTSS 622
            R  I GD LHS+P+ IN+G    PN        V V  GTN G+ H    + +     S 
Sbjct: 684  REDIMGDPLHSKPLAINFGEK--PNADGTENLDVRVIVGTNQGLVHMFKDSDSGSNDYSV 741

Query: 623  TNIVRPGGELWGFIPPEFIGKLSRLYANTPEVALSTTPGGITPKPTPRDDFFDGSTTVMQ 682
             ++     E W FIP E       L+ N P +  + + G  +          D S     
Sbjct: 742  GSVT----ETWAFIPQE-------LWHNVPTLRKNYSTGSHSVYG------MDLSPVAYT 784

Query: 683  DQRVTGS-PRTVIYLTARRGGSLVYALDVTDPVNPRYLW--SRSNTDIPELGQTWSKPRL 739
            +   +G   +  ++L  RRGG+  YALD+T+P  P + W    ++T   ELGQ+WS+P +
Sbjct: 785  ETDSSGKVNKAWVFLGMRRGGTSYYALDITNPDAPSFKWKIDSNSTGFEELGQSWSEPVV 844

Query: 740  MRVAGYTNPVLIMGAGYDAASEDSDPAPGTDTVGRGIVVLDAYSGVPVWSALANCSGVAG 799
              V G  +PVL++G G  A+SE +         G  + +++A SG  +    A  +G+A 
Sbjct: 845  TFVPGIDDPVLVIGGGM-ASSEGT---------GEAVYIVNAKSGAFIKKFSA--TGMA- 891

Query: 800  VCVKNTSLTRSIASDVTTVDRTGSGYIQMAYVGDVGGNIWRVDFQSAAGNTPANWALTQF 859
                      S+ + V  +D    G     Y  D+GGNIWR+D      +T + W+  +F
Sbjct: 892  ----------SVPNKVAVLDSNNDGITDRIYAADIGGNIWRMDMPE---STQSTWSTFKF 938

Query: 860  ATLGGAANTNNARKFFYAPDVVPT----------------AGFNAILAGTGDREHPLYSA 903
            A++  + + N+ R FF  P V  T                  ++A+  GTG+R HPL   
Sbjct: 939  ASIATSTSPND-RMFFAEPSVAQTQFNNIHDNSGELTYQSVPYDAVTIGTGNRTHPL--- 994

Query: 904  SNAPGTAYNVVNRFYMLKDPNL-------GPVPAGWTPLTEANLVDATSGAYN------- 949
                    N  + FY+ +D N+          PA    LT + L D T+ A +       
Sbjct: 995  ------DINTNDMFYVFQDRNVVTKTFTSTDAPAA---LTISELYDVTTAAPSSQSDNVT 1045

Query: 950  -GTGSGFFITLPNAGEKVVNAPLTVAG---YTTF--GTNTPAVPKAGMC 992
             GT  G+F     AGEK ++A L   G   +T+F   T T     AG+C
Sbjct: 1046 FGTKRGWFYDYSVAGEKTLSASLIFDGKVYFTSFIPPTRTDVDLDAGIC 1094