Pairwise Alignments

Query, 1089 a.a., PilC/PilY family type IV pilus protein from Ralstonia sp. UNC404CL21Col

Subject, 1168 a.a., type IV pilin biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  233 bits (594), Expect = 6e-65
 Identities = 241/849 (28%), Positives = 343/849 (40%), Gaps = 179/849 (21%)

Query: 180  TSYTSANPINNPCQRNYVIYIGNAVNNGKPQDTGK--NIQSDLASALGLSANTTPPQIVI 237
            T+ T  +P        YVIY    V +G P   G   N    L +A   S N +     +
Sbjct: 358  TNGTYVSPFKVCTDIAYVIY----VTDGSPTVDGSANNNVKTLTAAASKSGNYSSFSQGL 413

Query: 238  PSPYNKYQANWGDEWAQFMYRYDLQTKTIPKD-HPPQNIITYTISVTDGNNPDYVAFDQS 296
             +P      ++    A +M+  DL  K    +    QN+ TYTI  + G + D       
Sbjct: 414  STP------SYLPALASYMFNNDLINKPDSSNTEQMQNVRTYTIGFSKGAD-DAAPLLAE 466

Query: 297  MATNGGGKAYVAQ--LGKPDQLKDILLQIFNEIQAVNSVFASVSLPAAVNAQGQFLNQVY 354
             A  GGG  + AQ  L   + L D L  I N    ++S F S S+ +    + Q  +  Y
Sbjct: 467  TAKRGGGLYFAAQNSLELQNALNDALSNILN----IDSSFTSPSIASNNFDRTQTFDAAY 522

Query: 355  VGMFRPDASAAPRWMGNLKQYQVGYDANGTLQLLDSVGKPALSSAGTGFISPNAVSFWSA 414
              MF P     PRW GNLK+ +V   A+GTL  +D  G  A+  A  G I   A + W+ 
Sbjct: 523  YAMFLP--GKGPRWSGNLKKLRV--TADGTL--VDGEGNAAI--ADNGNIKETACTIWT- 573

Query: 415  DPPLAFGTSGYGSGVTNWPKNGFWINSPSGVGGASDSPDGEVVEKGGAGEMLRAQFLTDQ 474
                                              +   DG  VE GGA   LR Q     
Sbjct: 574  --------------------------------DCTSQKDGNKVEVGGAAAQLRGQL---- 597

Query: 475  STRVLYTCNGVGTCPTSGAMPTFDTSNTWLTGGAGKGLDAINSYNSVNGAPAITS----- 529
            +  +L    G     TS   P                L   N+ N+  G  A+ +     
Sbjct: 598  NRTILSNLAG-----TSSLSP----------------LTLSNAQNAAGGEQALATFMRTD 636

Query: 530  -SEQNYFINWVRGRDVYAMDGSTKAPTVGQEAETGPGSPVTIRPSIHGDVLHSRPVVINY 588
              E    ++W++G DV              + +   GS    R  + GD LHS+P+ +N+
Sbjct: 637  IDEVANTLDWLKGIDV--------------DDDNKNGSITDKRNDVMGDPLHSKPLALNF 682

Query: 589  GTSTAPNVVVYYGTNDGVFHAVNGNQATGIKTSSTNIVRPGGELWGFIPPEFIGKLSRLY 648
            G+ TA ++ +  GTN GV H          K +  ++     E WGFIP E +  L  L 
Sbjct: 683  GSETATDIRIILGTNQGVLHM--------FKDAGESV----SETWGFIPYELLPNLIELR 730

Query: 649  ANTPEVALSTTPGGITPKPTPRDDFFDGSTTVMQDQRVTGS-PRTVIYLTARRGGSLVYA 707
             N P   + T  G             D S     +   TG   +  +++  +RGGS  YA
Sbjct: 731  TNDPS-GVHTVYG------------MDSSPVAYTETDSTGKVNKAWVFVGMQRGGSSYYA 777

Query: 708  LDVTDPVNPRYLW--SRSNTDIPELGQTWSKPRLMRVAGYTNPVLIMGAGYDAASEDSDP 765
            LDV++P +P  +W  + S+    +LGQTWS+P + ++ GY  PVLI G GYD   E  D 
Sbjct: 778  LDVSNPDSPSLMWTINPSSDGFVDLGQTWSEPIVTKIVGYDKPVLIFGGGYD---ESFDA 834

Query: 766  APGTDTVGRGIVVLDAYSGVPVWSALANCSGVAGVCVKNTSLTRSIASDVTTVDRTGSGY 825
             P T   GR I ++DA  G  + S   + SG   +      +  SI + V  +D    GY
Sbjct: 835  TPTTSPQGRAIYIVDAQKGTLIHSFGGSASGATVL----PGIQGSIPNSVAVLDSNNDGY 890

Query: 826  IQMAYVGDVGGNIWRVDFQSAAGNTPANWALTQFATLGGAANTNNARKFFYAPDVVPT-- 883
                Y  DV GNIWR+D  +A+  T   W   +FA+LGG+ + N  R+FF  P V  T  
Sbjct: 891  TDRIYASDVTGNIWRMDLPTASSGT---WTAFKFASLGGSNSDN--RRFFAEPVVAQTMF 945

Query: 884  AGFNAILAGTGDREHPLYSASNAPGTAY-------------NVVNRFYMLKDPNL----- 925
               + +   TG       +  N P  A              NV + F+ML+D N+     
Sbjct: 946  TNLSEVSVTTGTETVTTKTHQNVPYDAVAVGSGMRSSPSSTNVNDMFFMLQDRNVVTKSF 1005

Query: 926  --GPVPAGWTPLTEANLVDATSGAYN--------GTGSGFFITLPNAGEKVVNAPLTVAG 975
                VPA    +T  NL D TS A          GT  G+F      GEK + A L V G
Sbjct: 1006 TGSNVPA---TITINNLYDVTSSAPTSETDNINFGTKFGWFYDFSGLGEKSLTAALIVQG 1062

Query: 976  YTTFGTNTP 984
               F + +P
Sbjct: 1063 KVYFTSYSP 1071