Pairwise Alignments

Query, 1089 a.a., PilC/PilY family type IV pilus protein from Ralstonia sp. UNC404CL21Col

Subject, 596 a.a., pilin biogenesis protein-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  173 bits (438), Expect = 4e-47
 Identities = 150/535 (28%), Positives = 227/535 (42%), Gaps = 93/535 (17%)

Query: 498 DTSNTWLTGGAGKGLDAINSYNSVNGAPA---------ITSSEQNYFINWVRGRDVYAMD 548
           + S+  L    G GL A    N+   A           +  +E     +W +G DV   D
Sbjct: 3   EASSRTLYSNLGSGLSAFTLSNASRKAGGNARLATYMGVDETELTGLFDWAKGIDV---D 59

Query: 549 GSTKAPTVGQEAETGPGSPVTIRPSIHGDVLHSRPVVINYGTSTAPNVVVYYGTNDGVFH 608
                    Q+     G+    R  I GD LHS+P+ +N+G+   P++ +  GTN G  H
Sbjct: 60  NDKN-----QDLTAASGATPNWRTDIMGDALHSKPLALNFGSEAKPDIRILVGTNHGFLH 114

Query: 609 AVNGNQATGIKTSSTNIVRPGGELWGFIPPEFIGKLSRLYANTPEVALSTTPGGITPKPT 668
                     K    ++     E WGF+P E +  +  L AN P    S    GI   P 
Sbjct: 115 M--------FKDKGDSV----SEAWGFMPYELLPNIRDLKANAPTGVHSVY--GIDGSPV 160

Query: 669 PRDDFFDGSTTVMQDQRVTGSPRTVIYLTARRGGSLVYALDVTDPVNPRYLW--SRSNTD 726
                   + T MQ +R+    +  +++  RRGG+  YALDVT P NP ++W    S+  
Sbjct: 161 --------AYTKMQGKRI---EKAWVFVGMRRGGNAYYALDVTSPDNPSFMWRIDASSPG 209

Query: 727 IPELGQTWSKPRLMRVAGYT--NPVLIMGAGYDAASEDSDPAPGTDTVGRGIVVLDAYSG 784
           + ELGQ+WS P +  +   T   PVLI G GY  +++D       D+ GRG+ ++DA +G
Sbjct: 210 MGELGQSWSTPVVTTIPSATGDKPVLIFGGGYSPSTKDGAEIGTDDSRGRGVFIVDAQTG 269

Query: 785 VPVWSALANCSGVAGVCVKNTSLTRSIASDVTTVDRTGSGYIQMAYVGDVGGNIWRVDFQ 844
                +L +  G +G       +  SI S V  +D  G G     Y  D+ GN+WR+D  
Sbjct: 270 -----SLIHQFGGSGANTPLPGIANSIPSSVAVLDGNGDGLTDRIYATDIQGNVWRMDMP 324

Query: 845 SAAGNTPANWALTQFATLGGAANTNNARKFFYAPDVVPT--------------------- 883
           SA  +T   W+  +FA LG  ++    R+FF  P V  T                     
Sbjct: 325 SANTST---WSGFKFAALGDKSSVAGDRRFFSGPIVAQTLISNTFELTKVVNGKSTKVVT 381

Query: 884 ---AGFNAILAGTGDREHPL-YSASNAPGTAY--NVVNRFYMLKDPNLGPVPAGWTPLTE 937
                ++AI+ G+G R  P   S S+   T    N+V + +  K  N  PVP     L  
Sbjct: 382 SQNIPYDAIVIGSGHRAKPSDVSRSDMFFTLQDRNIVTQSFQGKS-NQKPVP---KTLQL 437

Query: 938 ANLVDATSGAYN--------GTGSGFFITLPNAGEKVVNAPLTVAGYTTFGTNTP 984
           ++L D T+ A +        G   G++      GEK +++   V G   F +  P
Sbjct: 438 SDLYDVTAAAPSDQASEIAFGQKRGWYYNFSRKGEKSLSSATIVGGEVYFTSFVP 492