Pairwise Alignments

Query, 568 a.a., DNA repair protein RecN from Ralstonia sp. UNC404CL21Col

Subject, 550 a.a., SMC domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  205 bits (522), Expect = 3e-57
 Identities = 173/565 (30%), Positives = 252/565 (44%), Gaps = 43/565 (7%)

Query: 1   MLRSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADAAVVREGAP 60
           ML  L IRD  ++  ++LD A G    TGETGAGKS ++ AL   +G+R  + +VR G  
Sbjct: 1   MLEYLRIRDLALIEDMELDFAPGLNALTGETGAGKSFILKALNFLIGDRLTSDMVRPGKE 60

Query: 61  RADITAEFDVHPHVVAWLEAHELHDDEGVILLRRTVDA-AGRSKAFINGAAVTLAQLREV 119
           +A + A F +                +G ++LRR + A  GRS+ FIN    +   +R++
Sbjct: 61  KAHVEALFAL---------------PDGDMVLRRELTADTGRSRLFINDRLSSQDAVRDM 105

Query: 120 GEQLVDIHGQHAHQLLLKTDAQRSLLDAHAGLESAVRMVGERYREWHAVVRAREAAEQQS 179
              LV    QH  Q LL+   Q  LLD        +    +  +    V   RE    ++
Sbjct: 106 RASLVVHTSQHGQQKLLQPAFQARLLDEFLNRPDLLAARDDALKGLREVAARREELAARA 165

Query: 180 REAQLERERIEWQVNELQKLGPQPGEWEEIQAEHHRLSHAASLIEGTRAALDGLSESEG- 238
           R  +  R+ +E+Q  E+ K+ P+ GE E ++     L   AS  +    AL  L   +G 
Sbjct: 166 RSLEDRRDVLEFQQREIDKVAPEAGEEERLEERRRALRDVASAQQAQERALAVLRGEDGP 225

Query: 239 AVLTQLGATLHTLRELAEIDPA---------------LADVLAALEPAEVQIQEAVHTLA 283
            V   LG    TL  LA +  A                ADV   +      + +    L 
Sbjct: 226 GVAEALGLLERTLDGLARLHGADSGDAAPGSGDASGWAADV-TTISAFRQGLSDLERRLR 284

Query: 284 RYADRAELDPDRLAEVDA---RMQALHTMARKYRVAPETLPAELAERQAQLAALQAAS-D 339
           R    A  D D   +V+A   R+  L  + RK R   + +     E +  L+ L A   D
Sbjct: 285 RRPAPAASDGDDDMDVEAIEKRLYELAQLKRKLRRTLDEIVDLRREIEENLSFLDACRLD 344

Query: 340 LDALQAQEAQAHAAYMTVAQSLSRDRAKAARELADAVTGAMQGLSMAGG---RFDIALHA 396
           L  L+ +E         V   L+  R +AA  LA A+ G + GL  +      FD   H 
Sbjct: 345 LRTLEREEEARKEQLCAVLAELNPARQEAATRLAQALEGELAGLGFSEHVRVTFDFTPHE 404

Query: 397 LDQGGAAGLEQVEFLVAGHAGVSPRPLAKVASGGELARISLAISVIASEASPTPTLIFDE 456
              G     ++   +   + G  P+PL ++ASGGEL+R  LA+  + +    T TLIFDE
Sbjct: 405 PWPGCVE--DRARLMWVPNPGQPPQPLDRIASGGELSRFLLAVVGLMAR-DETATLIFDE 461

Query: 457 VDSGIGGAVAEVVGRRLRELGMRRQVLCVTHLPQVAALANHHIQVAKQTVAGSTRSDLVV 516
           VDSG+GG     V  RL  L  RRQV+ +TH PQ+AA A  H QV+K+    +T +    
Sbjct: 462 VDSGVGGLTLNRVSERLAALAGRRQVILITHWPQLAARAGRHFQVSKEVADNATFTLCRR 521

Query: 517 LDATGRVDEIARMLGGASLTDTTRR 541
           LD      E+ARM GG    +   R
Sbjct: 522 LDGEDIRKELARMAGGGGQGEAMAR 546