Pairwise Alignments

Query, 665 a.a., NAD-dependent DNA ligase LigA from Phocaeicola vulgatus CL09T03C04

Subject, 698 a.a., DNA ligase (NAD+) (NCBI) from Rhodospirillum rubrum S1H

 Score =  443 bits (1139), Expect = e-128
 Identities = 261/691 (37%), Positives = 388/691 (56%), Gaps = 30/691 (4%)

Query: 1   MTEIE---RIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSP 57
           +TE E    +++L  E+ RH+  Y+  +APEITD E+D L+R   ++E   PE    +SP
Sbjct: 7   LTEAEAARELERLAAEIARHDRLYHQQDAPEITDGEYDALVRRNNEIEAAFPELVRGDSP 66

Query: 58  SMRVGSDINKNFTQVVHKYPMLSLANTYSETEVTEFYDRVKKSLNEDFEIC----CEMKY 113
           S  VG+   + F +V H  PMLSL N +S+ E  EF  R+++ L+ D E       E K 
Sbjct: 67  SAHVGAAPAEGFAKVTHALPMLSLGNVFSDDEAREFDQRIRRFLSLDGETTISYVAEPKI 126

Query: 114 DGTSISLTYENGKLVRAVTRGDGVQGDDVTGNVKTIRSIPLVLHGKG-YPETFEIRGEIL 172
           DG S S  YENG   RA TRGDG  G+D+T N+ T+  +P  L G G  PE  E+RGE+ 
Sbjct: 127 DGLSFSARYENGVYRRAATRGDGTTGEDITANLATLTDLPQRLTGDGPVPEVLEVRGEVF 186

Query: 173 MPWVVFEELNKEREAREEPLFANPRNAASGTLKLQNSAIVASRKLDAYLYYLLGD--NLP 230
           M    F  LN+ +       FANPRNAA+G+L+  +  I  SR L  + Y   G+   L 
Sbjct: 187 MTKADFRALNQRQIDAGAKPFANPRNAAAGSLRQLDPEITRSRSLSLFAY-ASGEVKGLE 245

Query: 231 CDGHYENLKEAEKWGFKISDLTRKCKTLQEVFDFIKYWDVERKNLPVATDGIVLKVNSLR 290
            + H+  L+  + WGF ++  TR C+ ++++ +      ++R  L    DG+V KV+ + 
Sbjct: 246 VESHHAFLERLKTWGFPVNPQTRPCQGVEDLIEATHALALQRAALDYDIDGVVYKVDRVD 305

Query: 291 QQRNLGFTAKSPRWAIAYKFQAEQALTRLNKVTYQVGRTGAVTPVANLDPIQLSGTVVKR 350
            Q+ LGF +++PRWAIA KF AE+A T +  +  QVGRTG +TPVA L+P+ + G VV R
Sbjct: 306 WQKRLGFVSRAPRWAIARKFPAERAQTTVKAIQIQVGRTGTLTPVAILEPVTVGGVVVGR 365

Query: 351 ASLHNADIIEGLDLHIGDMVYVEKGGEIIPKIVGVDKDARIMIGDKVKFITHCPECGSKL 410
           A+LHN D I   D+ IGDMV +++ G++IP++V V  D R        F   CP CGS  
Sbjct: 366 ATLHNEDEIARKDVRIGDMVTIQRAGDVIPQVVEVLLDQRPADSAPFVFPETCPVCGSHA 425

Query: 411 VRYEGEAAYYCTNDAACPPQIKGKIEHFISRRAMNIDGLGPETVDQFYQEGLIRDVADLY 470
           VR EGE A  C     C  Q   +++HF+SR A +I+GLG + ++ F+ EGLI   AD++
Sbjct: 426 VRQEGEVARRCAGGLICSAQAVERLKHFVSRDAFDIEGLGGKHIETFHNEGLITQPADIF 485

Query: 471 TLKTSD--------IINLERMGEKSAENIIKGIEQSKEVPFERVLFALGIRFVGETVAKK 522
            L+  D        + + E  G KSAEN+ K I   K +P +R ++ALGIR VG+  A+ 
Sbjct: 486 ALEAKDNEPGALQHLRSREGWGPKSAENLFKAITARKTIPLDRFIYALGIRQVGQATARL 545

Query: 523 VAKSFKSMDALADA----------SLDNLIHVDEIGEKIAQSILLYFANPKNRDIIERLR 572
           +A  + S  A   A          +  +L +++ IG  +A+ ++ +F    NR  ++ L 
Sbjct: 546 LAGHYASFAAWRKAMDEAQTEGSEAFADLQNIESIGPSVARDLVAFFGEEHNRAALDALI 605

Query: 573 VAGVRLEADEEDTSEHTDKLAGKSIVISGVFAHHSRDEYKELIEKHGGKNVGSISSKTSF 632
            AGV +       +     LAGK++V +G     SR E K      G K  GS+S+KT +
Sbjct: 606 DAGVEVLDFARPQAAGDSPLAGKTVVFTGTLDTMSRGEAKARALALGAKVTGSVSAKTDY 665

Query: 633 ILAGDNMGPSKLEKAQKLGVTIVSEEEFLQM 663
           ++ G + G SK +KA++LG+T++SE EF  M
Sbjct: 666 VVVGADAG-SKEKKARELGLTVLSEAEFRAM 695