Pairwise Alignments

Query, 456 a.a., MATE family efflux transporter from Phocaeicola vulgatus CL09T03C04

Subject, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 3e-29
 Identities = 108/435 (24%), Positives = 194/435 (44%), Gaps = 24/435 (5%)

Query: 9   ELGTQPIGKLLLQYAIPAIIAMTASSLYNMVDSIFIGH-GVGPLAISGLAITFPLMNLAA 67
           +  T  + K L Q   P +  + +   + +VDS FIG  GV PLA  G  +   ++ +  
Sbjct: 4   QTSTSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGI 63

Query: 68  AFGSLVGVGASTLVSVKLGQKDYATAQNILGNVVTLNFIIGIGFSILTL---LFLDPILY 124
             G  +G+  + ++S  +G      A+ + G V+ +    GIG +++ L   L   P+L 
Sbjct: 64  QVG--LGIATTAVISRAIGAGKTEYAKQLGGLVIVIG---GIGVALIALVLYLLRQPLLG 118

Query: 125 FFGASPDTISYARDYMVIILLGNVITHMYLGLN-ALLRASGHPQKAMTATITTVIINTIL 183
             GA P+T+    D+  +  L +  T   L    ++ RA+G+     T  + T ++N IL
Sbjct: 119 LLGA-PETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLIL 177

Query: 184 DPIFIYLFHWGIQGAAIATILAQIISLVWQFKTFTNKNELLHLRRGIYKLRGTIVKNTIA 243
           DPIFI+ F  GI GAAIATI+A  + +         +    +  + +      I ++  A
Sbjct: 178 DPIFIFTFDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDL-----NISQSLTA 232

Query: 244 IG--MSP-FLMNLAACFIVIFINKGLKEYDGDLAIGAFGIVNRIVFLFVMIVMGLNQGMQ 300
           +G  M P  L  L      +F  K L  + G  A+ A+ + +R  F  ++ V+ +   + 
Sbjct: 233 LGHIMGPAMLSQLLPPLSSMFATKLLASF-GTAAVAAWALGSRFEFFALVAVLAMTMSLP 291

Query: 301 PIAGYNFGAQQYHRVNQVLKLTIYGATAVTTTGFLVGELMPELAVSAFTTHEGLIQLSAT 360
           P+ G   GA++   + Q++++             LV  +         T+   + Q+   
Sbjct: 292 PMIGRMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNL 351

Query: 361 GLRIVVIFFPIIGFQMVTSNFFQSIGMAGKAIFLSLTRQLLFLLPSIILLPLCWGSAGIW 420
            L IV I    +G  M+  +   ++G +  A+ +S  R   F LP + L    +G  G++
Sbjct: 352 HLVIVPISLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLF 411

Query: 421 WSMPISDLAASVVAG 435
               I  L  +++AG
Sbjct: 412 ----IGALVGNIIAG 422



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 385 IGMAGKAIFLSLTRQ-LLFLLPSIILLPLCWGSAGIWWSMPISDLAASVVAGIMLYRQFK 443
           IG+A  A+ L L RQ LL LL +   +        +WW        AS   G MLY  + 
Sbjct: 100 IGVALIALVLYLLRQPLLGLLGAPETVFAIIDHYWLWW-------LASAWTGAMLYFYYS 152

Query: 444 IFKTHGNKL 452
           + + +GN L
Sbjct: 153 VCRANGNTL 161