Pairwise Alignments

Query, 328 a.a., cytochrome d ubiquinol oxidase subunit II from Paraburkholderia bryophila 376MFSha3.1

Subject, 333 a.a., Cytochrome bd ubiquinol oxidase, subunit II (NCBI) from Rhodospirillum rubrum S1H

 Score =  209 bits (531), Expect = 1e-58
 Identities = 125/319 (39%), Positives = 174/319 (54%), Gaps = 12/319 (3%)

Query: 14  WFGLIGLMLLLYVVTDGFDLGVGILTLLRSREADRDLMIQSIGHVWDANETWLVALGGAL 73
           W  LI   +  YVV DGFDLG+GIL      E +R+  + SI  VWD NETWLV  GG L
Sbjct: 9   WGMLIAFAVFAYVVLDGFDLGIGILFPFLGGEDERNRAMNSIAPVWDGNETWLVLGGGGL 68

Query: 74  FGAFPQAYAMILSDLYVPVMVLIASFIMRGAAIEFRHAAHTSKTAWDRVFGLGSLLAAVS 133
           F AFP+AY+++++  Y PV+ ++ + + RG A EFR  A   K  W   F  GSL+AA+ 
Sbjct: 69  FAAFPEAYSVLMTAFYAPVIAMLLALVFRGVAFEFRFMAKRGKRFWTAGFFAGSLMAALC 128

Query: 134 QGIVLGKLLTG--FVPGLANTG-------FVAITAVGVVSGYCLLGATWLVKKTTGSMES 184
           QG++LG  + G  F  G    G       F  +T   VV GY LLGA WL  KT G +  
Sbjct: 129 QGMMLGAFVQGIAFEDGRYAGGWFDWFSPFSLLTGAAVVCGYSLLGAGWLAIKTDGPLAD 188

Query: 185 SSRRQAIIAVFTTVIAALIVSFGTLKQSPVGITRW-QEHGVFHLLIALAVLAALAFVYVL 243
            + R A +A   T++A + VS  T   +P+   RW     ++H    +AV+   A   +L
Sbjct: 189 FAFRIARLAGVVTLVAIVAVSALTPLVAPLAAERWFGPQMLWHAPAPIAVVVLGA--VLL 246

Query: 244 YSVHMRGEHGPFFGATLLFMFSFAGLAISLFPYIVPGQLTVAEAASDSATLTFMLFGIGI 303
            ++  R E   F     LF   + G A+S +PYI+P  +T   AA+D A L F+L G  +
Sbjct: 247 RAIARRRELTLFLSGLGLFATCYIGFALSKYPYIIPDHVTFRAAAADEAALAFLLPGALV 306

Query: 304 VFPIMVGYNLYQYHLFRGK 322
           + PI++GY  Y Y +FRGK
Sbjct: 307 LIPIILGYTAYAYWVFRGK 325