Pairwise Alignments

Query, 334 a.a., flagellar protein FlgJ from Paraburkholderia bryophila 376MFSha3.1

Subject, 384 a.a., flagellar protein FlgJ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (250), Expect = 5e-26
 Identities = 49/146 (33%), Positives = 77/146 (52%)

Query: 188 DAFVDKLAAPAQAASAATGIPARFIIGQAALESGWGKSEIKKADGSTSHNVFGIKATKDW 247
           + F+  L   A+ A+ A G     ++ Q+ALE+GWG+  ++  +G+ SHN+F IKA + W
Sbjct: 226 EEFLATLYPHAEKAAKALGTKPEVLLAQSALETGWGQKIVRGHNGAPSHNLFNIKADRRW 285

Query: 248 TGKTVSTLTTEYVNGKPQRVVEKFRAYDSYQEAMTDYASMLKGNPRYAQVINSAHDVKGF 307
            G   +  T E+  G   R    FR Y+ +  +  D+ S +    RY      A     F
Sbjct: 286 QGDKANVSTLEFEQGIAVRQKADFRVYNDFDHSFNDFVSFIADGERYQDAKKVAASPTQF 345

Query: 308 ATGMQRAGYATDPHYAKKLMSIMQKM 333
              +Q AGYATDP YA+K++ +MQ +
Sbjct: 346 IRALQEAGYATDPKYAEKVIKVMQSI 371



 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 4/89 (4%)

Query: 21  LDVQGFAKLSAQAKASPQAGMKVAAQQFDAVFTQMMLKSMRDAT---PQDGPFDSHDSAT 77
           LD+ G   L AQA+   +  +K  AQQF+ VF QM++KSMRDA      D P +S  +  
Sbjct: 11  LDLGGLDNLRAQAQKDEKGALKKVAQQFEGVFVQMLMKSMRDANAVFESDSPLNSQYTKF 70

Query: 78  FTSMMDQQLSQQMSQKGI-GVADAMLKQL 105
           +  M DQQLS  +S KG+ G+AD M++QL
Sbjct: 71  YEQMRDQQLSVDLSDKGVLGLADMMVQQL 99