Pairwise Alignments

Query, 532 a.a., poly(A) polymerase from Paraburkholderia bryophila 376MFSha3.1

Subject, 502 a.a., tRNA nucleotidyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 89/355 (25%), Positives = 139/355 (39%), Gaps = 50/355 (14%)

Query: 89  VTEGLQQAGHRAFIVGGAVRDLLLGIKPKDFDVATD----ATPEQVQKLFRRARIIG--R 142
           + E     G   ++VGG VRD+ L    KD DV       A  E + K   R   +   +
Sbjct: 46  IAETADALGLECYVVGGYVRDIFLQRPSKDIDVVVVGSGIAMAEALGKRLGRGAYVSVFK 105

Query: 143 RFQIVHVQFGQEIIETSTFRALVDPPAADAAPPRRLKRDELDRRTHAVDASGRVLRDNVW 202
            F    V++    +E    R                      + ++  D+   ++ D   
Sbjct: 106 NFGTAQVKYKGTEVEFVGAR----------------------KESYQRDSRKPIVED--- 140

Query: 203 GEQHEDATRRDFTINAMYY---DPATETVLDYHNGMADVRARLLRMIGDPATRYREDPVR 259
           G   +D  RRDFTINAM           ++D   GMAD++ + +R   DP   + +DP+R
Sbjct: 141 GTLEDDQNRRDFTINAMAVCLNKARFGELVDPFGGMADMKEKTIRTPLDPDITFSDDPLR 200

Query: 260 MLRVVRFAAKLDFEIEDATRAPIAEMADLINNVPAARLFDEMLKLMLSGHALACLKRLRQ 319
           M+R +RFA +L+F I+D T   +    D I  +   R+ DE+ K++LS         L +
Sbjct: 201 MMRCIRFATQLNFYIDDDTFESLCRNKDRIEIISRERIADELNKIILSPIPSKGFVELER 260

Query: 320 EGLHHGLLPLLDVV--LEQPTGEKFITLALTNTDARVRAGKPVSPGFLFATLLWHDV--- 374
            GL   + P L  +  +E   G           +      K     +L    L HD+   
Sbjct: 261 SGLLPLIFPELAALQGVETRNGRSHKDNFYHTLEVLDNISKKTDNLWLRWAALLHDIAKP 320

Query: 375 -QQRWQ--------KFEANGEYPVPALHRAMDEVLDMQTEKLAIHKRFSSDMREI 420
             +RW+             GE  +P + R M   L M  +   + K  S  MR I
Sbjct: 321 ATKRWEPKAGWTFHNHNFIGEKMIPNIFRKMK--LPMNEKMKYVQKMVSLHMRPI 373