Pairwise Alignments

Query, 316 a.a., protein translocase subunit secF from Paraburkholderia bryophila 376MFSha3.1

Subject, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 6e-49
 Identities = 103/278 (37%), Positives = 159/278 (57%), Gaps = 7/278 (2%)

Query: 18  IFNAISLLTFLAAVFFLVHRGLHLSVEFTGGTVIEVQYPGAAPLDPVRGTLSKLGYADAQ 77
           I   IS+L  + ++     +GL++ ++FTGG V E     +     +   L  +      
Sbjct: 15  ITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVS 74

Query: 78  VQNFGTSRDVLIRLPLKQGLTSAQQSDQVMSALKTE--TPQVQLQRVEFVGPQVGKELAT 135
               G     +IR PL     +A+ +  V  A +    + QVQ+     VG QVG+EL  
Sbjct: 75  ATPSGEEGRWVIRYPL-----AAEDATPVDIATELHHISDQVQIVSNSMVGSQVGQELID 129

Query: 136 DGLLALACVVAGIVIYLSFRFEWKYAVAGVIANLHDVVIILGFFAFFQWEFSLSVLAAVL 195
            G LAL   +  I+ YLSFRFEW+ A   ++A LHDV+++LGFFA  Q EF+L+V AAVL
Sbjct: 130 QGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVL 189

Query: 196 AVLGYSVNESVVIFDRIRETFRRERKMTVIEVINHAITSTMSRTVITHGCTQMMVLSMFL 255
           AVLGYS+N+S++I DRIRE    +++    ++ + AI +T SRT++T G T M + +++L
Sbjct: 190 AVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWL 249

Query: 256 FGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVK 293
            GG  L  FA+A+ +GI+ G +SS+ +   L  W G++
Sbjct: 250 MGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLE 287