Pairwise Alignments

Query, 316 a.a., protein translocase subunit secF from Paraburkholderia bryophila 376MFSha3.1

Subject, 853 a.a., SecD export membrane protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (499), Expect = 1e-54
 Identities = 109/287 (37%), Positives = 167/287 (58%), Gaps = 2/287 (0%)

Query: 10  IPFMQRALIFNAISLLTFLAAVFFLVHRGLHLSVEFTGGTVIEVQYPGAAPLDPVRGTLS 69
           I FM+  L+    S++  +A+V    H GL+  V+F GGTV+EV+   A     +R  L 
Sbjct: 537 IAFMRGRLLGLGGSVVLSVASVVLFFHPGLNYGVDFAGGTVMEVRSQNAVDFPALRTDLQ 596

Query: 70  KLGYADAQVQNFGTSRDVLIRLPLKQGLTSAQQS--DQVMSALKTETPQVQLQRVEFVGP 127
            L     Q+Q FG+  DVLIRL  ++G  +AQ     QV   L+ +    +++RV+ VG 
Sbjct: 597 SLPIGPVQLQAFGSPNDVLIRLERQEGGDAAQAEVVKQVQGMLERDYAGSEIRRVDSVGA 656

Query: 128 QVGKELATDGLLALACVVAGIVIYLSFRFEWKYAVAGVIANLHDVVIILGFFAFFQWEFS 187
            V  EL  DG++AL      ++IY+ FRFEW++ V  V+  L DV   +GFFA    +F+
Sbjct: 657 SVSAELFQDGMMALGLAAIAMLIYIWFRFEWQFGVGAVVTMLLDVTKTVGFFAITGMQFN 716

Query: 188 LSVLAAVLAVLGYSVNESVVIFDRIRETFRRERKMTVIEVINHAITSTMSRTVITHGCTQ 247
           L+ +AA+L ++GYS+N+ VV++DR+RE  R  R M + ++I+ +I  T+ RTV T   T 
Sbjct: 717 LTAIAAILTIMGYSINDKVVVYDRVRENLRLYRTMPLRQLIDKSINETLGRTVGTSLATF 776

Query: 248 MMVLSMFLFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKR 294
           + ++ + +FGG  L  FAL L  G++    SSVF+AA L +  G  R
Sbjct: 777 LAIIPLAVFGGEALREFALVLLFGVVLATSSSVFIAAPLLLLLGEHR 823



 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 12/171 (7%)

Query: 125 VGPQVGKELATDGLLALACVVAGIVIYLSFRFEWKYAVAGVIANL---HDVVIILGFFAF 181
           VGP +G +    G++A++     +V Y+       Y + G  AN+    ++ I LG  + 
Sbjct: 351 VGPDLGADSIRAGMIAISVGFVLVVAYMGIF----YGLFGWFANVALVFNLAITLGALSL 406

Query: 182 FQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERKMTV-IEVINHAITSTMSRTV 240
            Q   +L  +A +L  LG +V+ +++I +RIRE  ++ R +   +E       +T+  + 
Sbjct: 407 MQATLTLPGIAGLLLSLGMAVDANILINERIREEAKKGRGVAASMETGFKRAFATIFDSN 466

Query: 241 ITHGCTQMMVLSMFLFGGPTLHYFALALTVGILFGIYSSVFVAAAL-AMWF 290
           IT   T + +  +F  G  T+  FA+ +++GI+  +++++ V   L  +WF
Sbjct: 467 IT---TLIKMAILFSIGVGTIRGFAVTISLGIIVSMFTAITVTRLLMVIWF 514