Pairwise Alignments

Query, 316 a.a., protein translocase subunit secF from Paraburkholderia bryophila 376MFSha3.1

Subject, 315 a.a., protein-export membrane protein SecF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  260 bits (664), Expect = 3e-74
 Identities = 134/311 (43%), Positives = 205/311 (65%)

Query: 1   MEFFRFRKDIPFMQRALIFNAISLLTFLAAVFFLVHRGLHLSVEFTGGTVIEVQYPGAAP 60
           +E    ++ + F++ AL  + +S +  L ++  L  +GL+  ++FTGGTV+E+ +     
Sbjct: 2   LEILSLKRTVNFLKHALPVSIMSAVLVLGSIVLLATKGLNWGLDFTGGTVVEMSFSTPVD 61

Query: 61  LDPVRGTLSKLGYADAQVQNFGTSRDVLIRLPLKQGLTSAQQSDQVMSALKTETPQVQLQ 120
           L+  R  L+    + A VQN+G+SRDVL+RLP+K+G++S  Q  +++   +   P V  +
Sbjct: 62  LNQFRSQLTTPETSSAVVQNYGSSRDVLVRLPVKEGISSDVQVVEIVKFAQQLDPNVVQK 121

Query: 121 RVEFVGPQVGKELATDGLLALACVVAGIVIYLSFRFEWKYAVAGVIANLHDVVIILGFFA 180
           RVEFVGPQVGKELA  G LA+   +  I+IY++FRFEW+ A   V A  HDV++ LG F+
Sbjct: 122 RVEFVGPQVGKELAEQGGLAVLVALICIMIYIAFRFEWRLATGAVAALAHDVMVTLGVFS 181

Query: 181 FFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERKMTVIEVINHAITSTMSRTV 240
             Q EF L+VLA VL V+GYS+N+++V+FDR+RE F + RK    EV+N +IT TMSRT+
Sbjct: 182 LTQMEFDLTVLAGVLTVVGYSLNDTIVVFDRVRENFLKMRKSEPEEVVNVSITQTMSRTI 241

Query: 241 ITHGCTQMMVLSMFLFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKRDDLIKD 300
           IT G T ++V+++FL GG  +H FA AL +GI  G YSSV+VA  LA+  GV R+ ++  
Sbjct: 242 ITMGTTLVVVVALFLSGGSMIHGFAAALLLGISVGTYSSVYVATYLAIKLGVNRESMMPA 301

Query: 301 KKDRVDPNDPN 311
           + ++   + P+
Sbjct: 302 EIEKEGADQPS 312