Pairwise Alignments

Query, 316 a.a., protein translocase subunit secF from Paraburkholderia bryophila 376MFSha3.1

Subject, 294 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score =  179 bits (454), Expect = 7e-50
 Identities = 112/290 (38%), Positives = 172/290 (59%), Gaps = 16/290 (5%)

Query: 8   KDIPFMQRALIFNAISLLTFLAAVFFLVHRGLHLSVEFTGGTVIEVQYPGAAPLDPVRGT 67
           K+I   +   + +AIS+   LA++  +  +G +  ++FTGG V EVQ      LD  R T
Sbjct: 2   KNINLTKWRYVSSAISIFLMLASLTIIGMKGFNWGLDFTGGVVTEVQ------LDR-RIT 54

Query: 68  LSKLGYADAQVQNFGTSRDVLIRLPLKQGLTSAQQSDQVMSAL---KTETP--QVQLQRV 122
            S+L      + N    ++V +    + G    + +D   S +   +T  P  +VQ+   
Sbjct: 55  SSEL----QPLLNAAYQQEVTVISASEPGRWVLRYADTAQSNVDIAQTLAPLGEVQVLNT 110

Query: 123 EFVGPQVGKELATDGLLALACVVAGIVIYLSFRFEWKYAVAGVIANLHDVVIILGFFAFF 182
             VGPQVGKELA  G LAL   +  I+ YLS+RFEW+ A   + A +HDV+ +L FF+  
Sbjct: 111 SIVGPQVGKELAEQGGLALLVAMLCILGYLSYRFEWRLASGALFALVHDVIFVLAFFSLT 170

Query: 183 QWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERKMTVIEVINHAITSTMSRTVIT 242
           Q EF+L+VLAAVLA+LGYS+N+S++I DRIRE    + K+ + E+ N AI +T SRT++T
Sbjct: 171 QMEFNLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVT 230

Query: 243 HGCTQMMVLSMFLFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGV 292
            G T M V ++++ GG  L  F++A+ +GIL G +SS+ V  +L  + G+
Sbjct: 231 SGTTLMTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPEFLGL 280