Pairwise Alignments

Query, 187 a.a., RNA polymerase, sigma-24 subunit, RpoE from Paraburkholderia bryophila 376MFSha3.1

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 20/151 (13%)

Query: 30  DASLDIVQDAMIK-LAEKYGDRPAAELPLLFQRILQNAMHDHFRRAKVRNTWVSLFSSLG 88
           D + D+VQ A  + LA      P         RIL+N   D  RR K          + G
Sbjct: 31  DVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQK----------TAG 80

Query: 89  NADDDEFDPLETFEAQQGSAGAESNEQKLEREQVLQMIDDEIRKLPARQREAFLMRYWED 148
             DD           ++      S E++ E    L+ + + I +LP  QRE  L+   E+
Sbjct: 81  VQDDI---------TERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEE 131

Query: 149 MDVAETAAAMGCSEGSVKTHCSRATHTLAQA 179
           +   E A  MG   G+V +   RA  +LA+A
Sbjct: 132 LSYREAADVMGIPIGTVMSRLMRARRSLAEA 162