Pairwise Alignments

Query, 187 a.a., RNA polymerase, sigma-24 subunit, RpoE from Paraburkholderia bryophila 376MFSha3.1

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 13/181 (7%)

Query: 5   KELADFLAGVE---RRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGD-RPAAELPLLFQ 60
           ++LA F A ++   R+ ++     +R+D  + D++Q+A ++   ++ D R  A +     
Sbjct: 17  QDLARFRAIMQAHNRKLYRIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTWLA 76

Query: 61  RILQNAMHDHFRRAKVRNTWVSLFSSLGNADDDEFDPLETFEAQQGSAGAESNEQKLERE 120
           RI+ N      R+ + +            A+   F PL        ++G    E+ + + 
Sbjct: 77  RIVINEALGRLRKGRRQMRLAKYMRQSQEAEIIAF-PL--------NSGISDPEKTMAQR 127

Query: 121 QVLQMIDDEIRKLPARQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLAQAL 180
           Q+L +++     LP   R  F++R  E +D  E AA +G    + +T   RA   L + L
Sbjct: 128 QILDLVERLTDDLPDTYRTVFVLRVIEGLDNEEAAALLGLKPETARTRLHRARRILKEQL 187

Query: 181 K 181
           +
Sbjct: 188 E 188