Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 787 a.a., DNA helicase II UvrD from Phaeobacter inhibens DSM 17395

 Score =  475 bits (1223), Expect = e-138
 Identities = 314/810 (38%), Positives = 430/810 (53%), Gaps = 105/810 (12%)

Query: 5   LANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNKA 64
           L  LNP Q AAV     P L+LAGAG+GKT+ L  RI  L+  G A P  ILAVTFTNKA
Sbjct: 28  LDGLNPAQRAAVECLEGPVLMLAGAGTGKTKALTARIVHLLTTGTAKPNEILAVTFTNKA 87

Query: 65  AREMMSRLSALLPIDTRGM-WIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKR 123
           AREM  R++ +L     GM W+GTFH +C ++LR H    GL + F ILD  DQ+  +K+
Sbjct: 88  AREMKERVAGMLGQAVEGMPWLGTFHSICVKLLRRHAELVGLKSNFTILDADDQIRLLKQ 147

Query: 124 LMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDN--FNRKFVELYEAYDQQCQRE 181
           L+K   IDD+++PA+ L   I++ K + L P  V  +D   +N + V+ Y  Y  + +  
Sbjct: 148 LIKAEGIDDKRWPARMLAGVIDDWKNRALTPSKVPVSDASAYNHRGVDFYAQYQARLKDL 207

Query: 182 GVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQTNSIF 241
             VDF +LLL    +   NP +   YQ  F+ I+VDE+QDTN  QY WL+LLAG   +I 
Sbjct: 208 NAVDFGDLLLHMVTIFQDNPDVLEQYQRWFRFIMVDEYQDTNVAQYLWLRLLAGAHKNIC 267

Query: 242 AVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRRL 301
            VGDDDQSIY +RGA VGN+  FE +F   ++++LEQNYRS  HIL AA+ +I  NS RL
Sbjct: 268 CVGDDDQSIYGWRGAEVGNILRFEKDFPGANVVRLEQNYRSTEHILSAASGVIRGNSGRL 327

Query: 302 GKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGT------SRSEIAILYRSNA 355
           GK L T+A  GE VR+       +EA WI EEI+A+   GT        + +AIL R++ 
Sbjct: 328 GKELWTEARGGEKVRLIGHWDGEEEARWIGEEIEAM-QRGTRGLAPVDLNNMAILVRASH 386

Query: 356 QSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGI 415
           Q R  E   +  G+ YRV GG RF+ER E++ A+AY R + +P+DD AF R+VN P RG+
Sbjct: 387 QMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRQVISPDDDLAFERIVNTPKRGL 446

Query: 416 GARSIEQLADAARLYNCS------MAAAIPYVAGKAG-------SSLASFANLIGKMRAE 462
           G ++ + +   AR    S      +A     + GK G       + LA +  L G   A+
Sbjct: 447 GDKAQQTIQTMARSNGVSLVEGARLAVESGQIKGKGGKALHQLVTDLARWGRLAGD--AD 504

Query: 463 TQQMSLPETVEYVVRASGLADFYQNER--EGQDRLENLQELVNAAAAFVSEEGYGMDTPA 520
           T  M   E  E ++  SG    +Q ++  +   RLENL+ELV A  AF + +G+      
Sbjct: 505 TTHM---ELAEIILDESGYTTMWQADKNPDSPGRLENLKELVKALEAFENLQGF------ 555

Query: 521 RSIPLRPGATAAPELAVATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQ 580
                         +++  D+            D AQ    MT                 
Sbjct: 556 -----------LEHVSLIMDNDK---------QDAAQKVSIMT----------------- 578

Query: 581 AQAGQEAVQLMTVHAAKGLEFTAVFITGLEEGLFPHENSAMES--DGLEEERRLMYVAIT 638
                       +HAAKGLEF AVF+ G E+GLFP + S  ES   GLEEERRL YV IT
Sbjct: 579 ------------LHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGIT 626

Query: 639 RAKERLYLSFAQSRMLHGQTRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYG 698
           RA+E   +SFA +R + GQ +  + SRF DELP+E ++ LTP    G  +G  + + G G
Sbjct: 627 RAEEICTISFAGNRRVFGQWQSQLPSRFIDELPEENVEVLTPPGLYGGGYGAAAPSGGGG 686

Query: 699 RDWFARPDRQQGYGGGASTAAAPLPAFANEQ--------------RAAEAGFRVGQQVFH 744
                  DR     G  S     + + A E+                A + F VG++VFH
Sbjct: 687 AVRSTIEDRMAAADGYNSPGWKRMQSRAGERGLSQPRESKSSVIDLTATSAFMVGERVFH 746

Query: 745 TKFGEGTITALEGGGADAKAQVKFKRHGEK 774
            KFG G IT +EG     K +V+F++ G K
Sbjct: 747 QKFGYGAITGIEGD----KLEVEFEKAGTK 772