Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 771 a.a., Probable ATP-dependent DNA helicase II UvrD1 from Mycobacterium tuberculosis H37Rv

 Score =  428 bits (1101), Expect = e-124
 Identities = 289/796 (36%), Positives = 408/796 (51%), Gaps = 84/796 (10%)

Query: 4   LLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNK 63
           LL  LNP+Q  AV     P LI+AGAGSGKT VL  RIA+L+         ILA+TFTNK
Sbjct: 19  LLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLMAARGVGVGQILAITFTNK 78

Query: 64  AAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHR-DAGLPATFQILDTADQLSAIK 122
           AA EM  R+  L+    R MW+ TFH  C R+LR       GL + F I D  D    ++
Sbjct: 79  AAAEMRERVVGLVGEKARYMWVSTFHSTCVRILRNQAALIEGLNSNFSIYDADDSRRLLQ 138

Query: 123 RLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDA-----TDNFNRKFVELYEAYDQQ 177
            + + L +D ++Y  + L   I+N K + + P    A     +D+  R    +Y+ Y ++
Sbjct: 139 MVGRDLGLDIKRYSPRLLANAISNLKNELIDPHQALAGLTEDSDDLARAVASVYDEYQRR 198

Query: 178 CQREGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQT 237
            +    +DF +L+     +L   P +  +Y+ RF+H+LVDE+QDTN  QY  ++ L G+ 
Sbjct: 199 LRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHVLVDEYQDTNHAQYVLVRELVGRD 258

Query: 238 NS-------IFAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAA 290
           ++       +  VGD DQSIYAFRGA + N+ DFE ++     I LEQNYRS  +IL AA
Sbjct: 259 SNDGIPPGELCVVGDADQSIYAFRGATIRNIEDFERDYPDTRTILLEQNYRSTQNILSAA 318

Query: 291 NQLIANNSRRLGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALIS-TGTSRSEIAI 349
           N +IA N+ R  K L TDAG GE +  Y +  +  EA ++ EEI AL   +  + +++A+
Sbjct: 319 NSVIARNAGRREKRLWTDAGAGELIVGYVADNEHDEARFVAEEIDALAEGSEITYNDVAV 378

Query: 350 LYRSNAQSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVN 409
            YR+N  SR++E  L+ AGI Y+V GG+RF+ER+E++  +AYLR++DNP D  +  R++N
Sbjct: 379 FYRTNNSSRSLEEVLIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLDNPGDAVSLRRILN 438

Query: 410 FPTRGIGARSIEQLADAAR-----LYNCSMAAA---IPYVAGKAGSSLASFANLIGKMRA 461
            P RGIG R+   +A  A        +  +AAA   +P +  +A  ++A F  +  ++R 
Sbjct: 439 TPRRGIGDRAEACVAVYAENTGVGFGDALVAAAQGKVPMLNTRAEKAIAGFVEMFDELRG 498

Query: 462 ETQQMSLPETVEYVVRASGLADFYQNEREGQD--RLENLQELVNAAAAFVSEEGYGMDTP 519
                 L E VE V+  +G     +   + Q+  RL+NL ELV+ A  F           
Sbjct: 499 RLDD-DLGELVEAVLERTGYRRELEASTDPQELARLDNLNELVSVAHEF----------- 546

Query: 520 ARSIPLRPGATAAPELAVATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEA-GD 578
                             +TD  N   L      D    PDT   LA FL   SL A  D
Sbjct: 547 ------------------STDRENAAALGP----DDEDVPDTGV-LADFLERVSLVADAD 583

Query: 579 NQAQAGQEAVQLMTVHAAKGLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAIT 638
              + G   V LMT+H AKGLEF  VF+TG E+G+FPH  +      L EERRL YV IT
Sbjct: 584 EIPEHGAGVVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDNPTELSEERRLAYVGIT 643

Query: 639 RAKERLYLSFAQSRMLHGQTRYNIRSRFFDELPQETLKW--LTPKVEAGARWGGRSDNAG 696
           RA++RLY+S A  R   GQ   N  SRF  E+PQE + W    PK               
Sbjct: 644 RARQRLYVSRAIVRSSWGQPMLNPESRFLREIPQELIDWRRTAPKPS------------- 690

Query: 697 YGRDWFARPDRQQGYGGGASTAAAPLPAFANEQRAAEAGFRVGQQVFHTKFGEGTITALE 756
                F+ P      G G   +A P P  +   R      +VG +V H K+G G +  + 
Sbjct: 691 -----FSAPVS----GAGRFGSARPSPTRSGASRRPLLVLQVGDRVTHDKYGLGRVEEVS 741

Query: 757 GGGADAKAQVKFKRHG 772
           G G  A + + F   G
Sbjct: 742 GVGESAMSLIDFGSSG 757