Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  615 bits (1585), Expect = e-180
 Identities = 348/788 (44%), Positives = 478/788 (60%), Gaps = 87/788 (11%)

Query: 8   LNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNKAARE 67
           LN  Q  AVT  N+  L+LAGAGSGKTRVL+ RIAWL+      P  ILAVTFTNKAA+E
Sbjct: 10  LNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAVTFTNKAAKE 69

Query: 68  MMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKRLMKG 127
           M  R+  ++ I  RG+W GTFHG+ +R+LR+H +DAGLP  FQ+LD+ DQL  IKR+M+ 
Sbjct: 70  MRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQLRLIKRVMRE 129

Query: 128 LNIDDEKYPAKNLQYFINNAKEQGLRPKDVDAT--DNFNRKFVELYEAYDQQCQREGVVD 185
             ID+ K+P K  Q+FI++ K++GLR   +     D+F    +++Y  Y++ CQ+ G+VD
Sbjct: 130 NQIDESKWPPKQAQWFISSQKDEGLRVDHIQENPGDHFLSIMLKIYRQYEKLCQQGGLVD 189

Query: 186 FPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQTNSIFAVGD 245
           F ELLLR +EL  H P L AHYQ+RF+HILVDEFQDTN +QYAWL++LA     +  VGD
Sbjct: 190 FGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASNRVPMTVVGD 249

Query: 246 DDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRRLGKNL 305
           DDQSIY +RGA V N++ ++ +F    L++LEQNYRS   IL AAN +IANN  RLGK L
Sbjct: 250 DDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIANNQGRLGKEL 309

Query: 306 RTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTIEHTLV 365
            TD   GEP+ +Y +  +  EA +I + I A +  G  RSE AILYRSNAQSR +E +L+
Sbjct: 310 WTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQSRVLEESLM 369

Query: 366 NAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSIEQLAD 425
             GI YRVYGGLRF++RQE+++ALAYLRL+    DD AF RVVN P RGIGA+S+ +L +
Sbjct: 370 RQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIGAKSLAELRE 429

Query: 426 AARLYNCSMAAAIP------YVAGKAGSSLASFANLIGKMRAETQQMSLPETVEYVVRAS 479
            A   + S+  +         V G+A + L SF  +I  +       SL   ++  +  S
Sbjct: 430 YATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHGLMKQTIENS 489

Query: 480 GLADFYQNER--EGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAV 537
           GL D++ +E+  +GQ R+ENL+ELVNA + +  E+G                        
Sbjct: 490 GLKDYHASEKGEKGQARVENLEELVNALSDYEVEDG------------------------ 525

Query: 538 ATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAK 597
                    +DA               L+ F++ A+L+AG++QA   +++VQLMT+H+AK
Sbjct: 526 ---------VDA---------------LSEFIAQAALDAGESQAGDHEDSVQLMTLHSAK 561

Query: 598 GLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQ 657
           GLEF  VF+ G+EEGLFPH  S  E   +EEERRL YV ITRA ++L L++A+SR L+GQ
Sbjct: 562 GLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLAYVGITRAMKKLVLTYAESRRLYGQ 621

Query: 658 TRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGGAST 717
            ++N  SRF  E+P + L+ +                    R+   RP          + 
Sbjct: 622 EKFNALSRFVREIPGDCLQEVRL------------------RNTVTRP----------AM 653

Query: 718 AAAPLPAFANEQRAAEAGFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEKWLA 777
              P  +  ++  A ++GF +GQ+V H KFGEG +   EG G   + QV F   G KWL 
Sbjct: 654 VERPNESMFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFD-EGAKWLV 712

Query: 778 LAVAKLQA 785
           LA A L+A
Sbjct: 713 LAYAPLEA 720