Pairwise Alignments

Query, 787 a.a., ATP-dependent DNA helicase UvrD from Paraburkholderia bryophila 376MFSha3.1

Subject, 722 a.a., DNA-dependent helicase II (RefSeq) from Shewanella sp. ANA-3

 Score =  651 bits (1680), Expect = 0.0
 Identities = 364/791 (46%), Positives = 482/791 (60%), Gaps = 84/791 (10%)

Query: 4   LLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNK 63
           LL  LN +Q  AV  P    L+LAGAGSGKTRVL  RIAWL+Q    SP +ILAVTFTNK
Sbjct: 6   LLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNK 65

Query: 64  AAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKR 123
           AA EM  R+  +   +   MWIGTFHGL +R+LR H +DAGLP +FQILD+ DQ+  +KR
Sbjct: 66  AAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQVRLLKR 125

Query: 124 LMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATD-NFNRKFVELYEAYDQQCQREG 182
           ++K LN+D+++YP +  Q +IN  K+QGLRPK +DA      +  +++Y+ Y + C R G
Sbjct: 126 ILKSLNLDEKQYPPRQAQAYINGKKDQGLRPKHIDAGGFPIEQNLLKIYQVYQESCDRAG 185

Query: 183 VVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQTNSIFA 242
           +VDF E+LLR +EL  + P L AHYQ RFKHILVDEFQDTN +QYAW+++LAGQT ++  
Sbjct: 186 LVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRVLAGQTANVMI 245

Query: 243 VGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRRLG 302
           VGDDDQSIY +RGA V N+  F  +F     I+LEQNYRS G+IL A+N LIANN  RLG
Sbjct: 246 VGDDDQSIYGWRGAQVENLHRFLRDFPTATTIRLEQNYRSKGNILKASNALIANNPERLG 305

Query: 303 KNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTIEH 362
           K L TD   GEP+ +Y +  +  EA +IV  I      G + S+ AILYRSNAQSR +E 
Sbjct: 306 KELWTDEADGEPISLYCAFNEMDEARFIVGRINDWYEKGGNLSDCAILYRSNAQSRVLEE 365

Query: 363 TLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSIEQ 422
            L++ G+AYR+YGGLRFFERQE+K A+ Y+RLI N NDD AF RVVN P RGIG R+++ 
Sbjct: 366 ALLHKGLAYRIYGGLRFFERQEIKDAMGYMRLISNKNDDAAFERVVNTPPRGIGDRTLDI 425

Query: 423 LADAARLYNCSMAAAI------PYVAGKAGSSLASFANLIGKMRAETQQMSLPETVEYVV 476
           L   AR    ++  A         +AG+A S++  F +LI  ++ ETQ M+L    + V+
Sbjct: 426 LRSTARQQELTLWQACLRLLDEKVLAGRAASAVRGFMDLIVTLQEETQDMALYRMTDTVI 485

Query: 477 RASGLADFYQNER--EGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPE 534
           +ASGL   Y+ E+  +   R+ENL+ELV AA  F   E                     E
Sbjct: 486 QASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPE---------------------E 524

Query: 535 LAVATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVH 594
           L                        + M  L  FLSHA+LEAG+ QA A  +AVQLMT+H
Sbjct: 525 L------------------------EDMGELNAFLSHAALEAGEGQADAFTDAVQLMTLH 560

Query: 595 AAKGLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRML 654
           +AKGLEFT VF+ G+EEG+FP + +  E D L+EERRL YV +TRA E+LY+++A+SR +
Sbjct: 561 SAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCYVGMTRAMEKLYITYAESRRI 620

Query: 655 HGQTRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGG 714
           +G+  Y   SRF  E+P + +  +  K +                               
Sbjct: 621 YGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMAN------------------------ 656

Query: 715 ASTAAAPLPAFANEQRAAEAGFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEK 774
            +  +A   A AN     + GF VGQ+V H KFG+G +T  EG GA A+ QV F   G K
Sbjct: 657 -NRFSAQKSAVAN-----DTGFSVGQRVHHPKFGDGKVTNFEGSGAQARVQVNFSDFGSK 710

Query: 775 WLALAVAKLQA 785
           WL +A A+L+A
Sbjct: 711 WLVVAYARLEA 721