Pairwise Alignments

Query, 317 a.a., integrase/recombinase XerD from Paraburkholderia bryophila 376MFSha3.1

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score =  315 bits (806), Expect = 1e-90
 Identities = 163/297 (54%), Positives = 206/297 (69%), Gaps = 3/297 (1%)

Query: 23  ATSSASIDAFCDALWLEHGLSRNTLDAYRRDLRLFSEWLAQTRNASLDTASEADLNAYSA 82
           A   + ID + DALWLE GL+ N+ +AYR DL LF+ WL++ R   L  A    +  + A
Sbjct: 3   ALDDSVIDRYLDALWLEKGLADNSREAYRSDLALFNGWLSE-RGVRLAVAGREIILDHLA 61

Query: 83  ARQKD--KSTSANRRLSVFRRYYGWAVREHRAKVDPTLRIRSAKQPPRFPSTLSEAQVEA 140
            R  +  K+ S  R LS  R +Y + +RE    VDPTLR+   +     P  LSEA VEA
Sbjct: 62  WRLNNGYKARSTARFLSGLRGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVEA 121

Query: 141 LLGAPDIETALGLRDRTMLELMYASGLRVTELVTLKTVEVGLNEGVVRVMGKGSKERLIP 200
           LL APD+   +GLRDR MLE++YA GLRVTEL++L   +V + +GV+R  GKG+KERL+P
Sbjct: 122 LLAAPDLGDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQGVLRTFGKGNKERLVP 181

Query: 201 FGEEAHGWIERYLRDARPALLGPRAADALFVTSRAEGMTRQQFWNIIKRHAAVAGVHAPL 260
            G+EA  W+ERY R+ R  LLG +A D LF + R + MTRQ FW+ IK HA VAG+   +
Sbjct: 182 LGDEALHWLERYQREGRDELLGGKARDVLFPSLRGDQMTRQTFWHRIKLHAKVAGIATSI 241

Query: 261 SPHTLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVARERLKSLHAQHHPRG 317
           SPHTLRHAFATHLLNHGADLR VQ+LLGH+D+STTQIYTH+AR RL+ LHAQHHPRG
Sbjct: 242 SPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPRG 298