Pairwise Alignments
Query, 490 a.a., circadian clock protein KaiC from Paraburkholderia bryophila 376MFSha3.1
Subject, 504 a.a., circadian clock protein KaiC (NCBI) from Rhodospirillum rubrum S1H
Score = 129 bits (324), Expect = 2e-34
Identities = 122/483 (25%), Positives = 199/483 (41%), Gaps = 30/483 (6%)
Query: 16 TGVPGLDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSRGEKVLYMTLIAESHDK 75
TG+PG D I GGL G L+ G AG+ KTI S+Q ++ G + + + ++
Sbjct: 14 TGIPGFDLIAHGGLPAGRTTLIVGTAGSAKTIFSAQF----LAAGIQSFDQGAVFVTFEE 69
Query: 76 LLAHLKR-LTFFDENAVAQQML----FVSGYHELMQDG-------LDGFLKLIASSIYDY 123
+A ++R L F + A + FV ++DG L G L I ++
Sbjct: 70 SVADIRRNLAGFGWDIPAWEAAGKWSFVDASPYPLEDGDVVGSYDLGGLLARIEHAVRQT 129
Query: 124 RPSLMIIDGFRSAREFSETELSLSKFIHELNALAAAMDCTTLLLAPLSGNEPHPEHT--- 180
+ +++D + +L + + A M TTL+ A S E T
Sbjct: 130 PATRVVLDSLGAVFMRFADPATLRNELLRIAAALKDMGVTTLMTAERSEEEGPLTRTGIE 189
Query: 181 --LVDGLIELNRFSDGMRRAREIEVHKLRARNHLMGKHYFRIAE-SGLLMYPRLESQCAP 237
+ D ++ L +G RR R E+ K R H G+ F I SG+ + P +
Sbjct: 190 EFVADNVVILRNLREGERRRRTCEILKYRGAYHQKGEFPFAILPGSGVQVIPLSAMELRQ 249
Query: 238 SSGPVDLKTRISFGLPHLDIMFGGGLSQGSTTTLIGPSGVGKTMLCLQFLAAGVANGERC 297
S + RI G LD M GGG + S + G +G GKT++ FL G+ GERC
Sbjct: 250 GSSDL----RIPSGSVDLDGMCGGGFFRDSVVLVSGATGTGKTLMSTHFLNGGLQAGERC 305
Query: 298 LYLGSYEGPQRLLGKAEAVSIPLNDAYQDGRLAIQWQPAIELAVDEIAANALATAREIGA 357
L E +L A I A G+L + ++++
Sbjct: 306 LLFAFEESRPQLFRNASGWGIDFQAAEDSGQLRVVCDYPEVASIEDHLIKIKEEIDTFHP 365
Query: 358 TRMVIDGVEGFRDSALRVER-FGLFLNALLHQLREAGITALITEEMPLYPDHGNSRSSRV 416
R+ +D + + + ER F F+ L ++ + AL T P + + +
Sbjct: 366 HRVAVDSLSAI--ARICSERGFREFVIGLTSFIKHQEVAALFTSNTPTLMGGSSVTEAHI 423
Query: 417 SALTENLVLLRYAETEAGLRRAISIVKQRESAHDPSTHELVISSHGLDVIESPFSAAVSS 476
S++T++++LLRY ET + R + ++K R S H+ E I + G+ I PF
Sbjct: 424 SSITDSIILLRYVETFGEISRGVMVLKMRGSRHEKEIREFAIDATGMH-IGRPFRTVTGI 482
Query: 477 TTG 479
G
Sbjct: 483 LAG 485
Score = 54.7 bits (130), Expect = 7e-12
Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 64/262 (24%)
Query: 247 RISFGLPHLDIMFGGGLSQGSTTTLIGPSGVGKTMLCLQFLAAGVANGERCLYLGSYEGP 306
++ G+P D++ GGL G TT ++G +G KT+ QFLAAG+ + ++ ++E
Sbjct: 11 KLPTGIPGFDLIAHGGLPAGRTTLIVGTAGSAKTIFSAQFLAAGIQSFDQGAVFVTFEES 70
Query: 307 -----QRLLG---------------KAEAVSIPLND-----AYQDGRLAIQWQPAIELAV 341
+ L G +A PL D +Y G L + + A+
Sbjct: 71 VADIRRNLAGFGWDIPAWEAAGKWSFVDASPYPLEDGDVVGSYDLGGLLARIEHAV---- 126
Query: 342 DEIAANALATAREIGATRMVIDGVEG----FRDSA-LRVERFGLFLNALLHQLREAGITA 396
R+ ATR+V+D + F D A LR E L + L++ G+T
Sbjct: 127 -----------RQTPATRVVLDSLGAVFMRFADPATLRNE-----LLRIAAALKDMGVTT 170
Query: 397 LIT-----EEMPLYPDHGNSRSSRVSALTENLVLLRYAETEAGLRRAISIVKQRESAHDP 451
L+T EE PL +R+ + +N+V+LR RR I+K R + H
Sbjct: 171 LMTAERSEEEGPL------TRTGIEEFVADNVVILRNLREGERRRRTCEILKYRGAYHQK 224
Query: 452 STHEL-VISSHGLDVIESPFSA 472
++ G+ VI P SA
Sbjct: 225 GEFPFAILPGSGVQVI--PLSA 244
Score = 53.5 bits (127), Expect = 2e-11
Identities = 58/232 (25%), Positives = 92/232 (39%), Gaps = 13/232 (5%)
Query: 1 MTIHESQTSLRANVDTGVPGLDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSRG 60
M + + + LR + +G LD + GGG R V L+ G G GKT++S+ + G
Sbjct: 245 MELRQGSSDLR--IPSGSVDLDGMCGGGFFRDSVVLVSGATGTGKTLMSTHFLNGGLQAG 302
Query: 61 EKVLYMTLIAESHDKLLAHLKRLTF-FDENAVAQQMLFVSGYHELMQDGLDGFLKLIASS 119
E+ L + ES +L + F + Q+ V Y E+ ++ L I
Sbjct: 303 ERCL-LFAFEESRPQLFRNASGWGIDFQAAEDSGQLRVVCDYPEVA--SIEDHLIKIKEE 359
Query: 120 IYDYRPSLMIIDGFR------SAREFSETELSLSKFIHELNALAAAMDCTTLLLAPLSGN 173
I + P + +D S R F E + L+ FI A T L+ S
Sbjct: 360 IDTFHPHRVAVDSLSAIARICSERGFREFVIGLTSFIKHQEVAALFTSNTPTLMGGSSVT 419
Query: 174 EPHPEHTLVDGLIELNRFSDGMRRAREIEVHKLRARNHLMGKHYFRIAESGL 225
E H ++ D +I L +R + V K+R H F I +G+
Sbjct: 420 EAHIS-SITDSIILLRYVETFGEISRGVMVLKMRGSRHEKEIREFAIDATGM 470