Pairwise Alignments

Query, 490 a.a., circadian clock protein KaiC from Paraburkholderia bryophila 376MFSha3.1

Subject, 560 a.a., circadian clock protein KaiC (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (250), Expect = 1e-25
 Identities = 110/486 (22%), Positives = 197/486 (40%), Gaps = 18/486 (3%)

Query: 16  TGVPGLDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSRGEKVLYMTLIAESHDK 75
           TG+ G DE+  GGL  G   L+ G AG GKT+ ++    H V   ++        E    
Sbjct: 12  TGIAGFDELTLGGLPTGRPTLVCGSAGCGKTLFAATFLVHGVKDFDEPGVFVSFEERPVD 71

Query: 76  LLAHLKRLTFFDENAVAQQMLFV-------SGYHELMQDGLDGFLKLIASSIYDYRPSLM 128
           ++ ++  L F  ++ + +  + +       S   E+    L+G    +  +I       +
Sbjct: 72  IIDNVASLGFHLDDLIEEGRVVIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTIGAKRV 131

Query: 129 IIDGFRSAREFSETELSLSKFIHELNALAAAMDCTTLLLAPL---SGNEPHPEHTLVDGL 185
           ++D   S          L   I  L         TT++       S      E  + D +
Sbjct: 132 VLDTIESLFSAFSNPAILRAEIRRLFDWLKEKGMTTVITGERGEGSLTRQGLEEYVSDCV 191

Query: 186 IELNRFSDGMRRAREIEVHKLRARNHLMGKHYFRIAESGLLMYPRLESQCAPSSGPVDLK 245
           + L+   +     R + + K R  NH   ++ F I E G  + P   S    S    D  
Sbjct: 192 LLLDHRVENQISTRRLRIVKYRGTNHGTNEYPFLIDEDGFSVLP--VSALGLSHKIYD-- 247

Query: 246 TRISFGLPHLDIMF-GGGLSQGSTTTLIGPSGVGKTMLCLQFLAAGVANGERCLYLGSYE 304
            RIS G+  LD M  GGG  +GS+  + G +G GK+ L   F+ A    GE  +Y    E
Sbjct: 248 ERISTGVADLDAMLSGGGFHRGSSILVSGVAGSGKSSLAASFVDATCRAGESVIYFSFEE 307

Query: 305 GPQRLLGKAEAVSIPLNDAYQDGRLAIQWQPAIELAVDEIAANALATAREIGATRMVIDG 364
             ++     +++ I L      G+L          +++   A  L    ++  + +++D 
Sbjct: 308 SHEQATRNMKSIGIDLGQWMASGQLKYIATRPTFYSLEMHLAIVLREVIKLKPSLVILDP 367

Query: 365 VEGFRDSALRVERFGLFLNALLHQLREAGITALITEEMPLYPDHGNSRSSRVSALTENLV 424
           +  F +S  R+E  G+ L  ++  L+  G+T + T  M    D+     + +S+L +  +
Sbjct: 368 ISAFTESGERLEVQGMLLR-IVDFLKSRGVTGVFTHLMQ-SGDNLIKTDAGLSSLMDAWI 425

Query: 425 LLRYAETEAGLRRAISIVKQRESAHDPSTHELVISSHGLDVIESPFSAAVSSTTGLSATL 484
           LL   E      R + ++K R   H     E V+S  G+ ++  P+     + TG +  +
Sbjct: 426 LLLNREVNGEFNRELYLLKARGMEHSNQVREFVMSRSGISLL-PPYIGEGGALTGSARKI 484

Query: 485 QSRRPA 490
           +  R A
Sbjct: 485 EEARQA 490