Pairwise Alignments

Query, 1544 a.a., ATP dependent helicase, Lhr family from Paraburkholderia bryophila 376MFSha3.1

Subject, 863 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score =  228 bits (580), Expect = 3e-63
 Identities = 247/893 (27%), Positives = 371/893 (41%), Gaps = 140/893 (15%)

Query: 56  WFLKSFPAPTDAQAAAWPQIRQGRSTLVAAPTGSGKTLTAFLSALDDLVQQG-LANNGAL 114
           WF      P   Q   W  I +G S L+ A TGSGKT   +L AL+    +    N    
Sbjct: 12  WFASREWQPFPFQREVWQAIDRGESGLLHATTGSGKTYAVWLGALNRFATKAPRPNTTDK 71

Query: 115 PDETLVVYVSPLKALSNDIRLNLQVPLQGIAAELDARGLPPLDIRTAVRTGDTTQQERNA 174
           P    V++++P++AL+ D    LQ PL  +           ++    +RTGDT+  ER  
Sbjct: 72  PAPLTVLWITPMRALAADTARALQAPLYDLG----------INWSIGLRTGDTSGAERAR 121

Query: 175 LKKRAPHILVSTPESLYVLLGSDSGRRMLCTVRTVIVDEIHALAGSKRGSHLALSLERLD 234
             +R P  LV+TPESL +LL     R+    +R ++VDE H L G+KRG  L L+L RL 
Sbjct: 122 QGRRLPSALVTTPESLTLLLTRADARQAFAGLRMLVVDEWHELLGNKRGVQLQLALARLR 181

Query: 235 ALCGRRLPRI---GLSATQKPVSAVARFLVGGAPVDSDI---PADCAIIDVGHIRERDLA 288
               + +P +   GLSAT           +G  P   D+   P    ++  G + ++DL 
Sbjct: 182 ----QWMPELIVWGLSAT-----------LGNQPHALDVLLYPGSGRLVQ-GKV-DKDLR 224

Query: 289 LE--IPPVPLEAVMPNEVWERVYDRLAELVALHSTTLIFVNTRRMAERAARHLTERLGKD 346
           ++  +PP          +  R+  ++ E +   +TTL+F NTR  +E   + L +     
Sbjct: 225 VDTLLPPCIERFPWAGHLGLRMLPQVVEEIDSAATTLVFTNTRSQSEIWYQALLDARPDW 284

Query: 347 A--VAAHHGSLAKEHRFDAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAP 404
           A  +A HHGSLA+E R   EQ LK+G L+ ++ T+SL+LG+D   V+ V Q+GSP+ +A 
Sbjct: 285 AGLIALHHGSLAREVRDWVEQGLKQGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVAR 344

Query: 405 FLQRVGRSGHHVGGMPKGRLFPTSRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQI 464
            +QR GRSGH  G   +  L PT   +++E AA    +    ++A   P  PLDVL Q +
Sbjct: 345 LMQRAGRSGHAPGRTSRVTLVPTHSVEVVEAAAAQVAIGERRIEARSAPHRPLDVLVQHL 404

Query: 465 VAEVSSTEWSEDALFDLIRRAAPYAELAREQYDAVLRMLAEGYTSRNG-PRAAYIHRDVV 523
           V+      +  D LF  +R+A  Y +L  + +   L  +  G  S    P    +  D  
Sbjct: 405 VSMALGGGFRPDELFAEVRQAWSYRDLNEDHWQWALAFVRHGGHSLTAYPDYQRVEPDEA 464

Query: 524 SGTLRGRRGGKLVAVTSGGTIPENADYAVVLEPQ---AVNIGTVNEDFAVESLAGDVFQL 580
                  R   L    S GTI  +A  +V    +     ++GT+ E F      GD F  
Sbjct: 465 GLWKVPSRRVALRHRMSIGTIVSDASLSVKFWAKGGSGRSLGTIEEGFIARLRPGDNFLF 524

Query: 581 GNASYRILRIESGRVRVEDAQGQPPNIPFWLGEAPGRSDELSFGVARLREQIARLLASGD 640
           G     ++R+E+    V  A G+   +P W G     S EL+  V    EQ+    AS  
Sbjct: 525 GGRLLELVRVENMTAYVSRATGRKAAVPRWNGGRMPLSSELADAVV---EQLG--AASRG 579

Query: 641 DATTPLDNAQASDTASKATASEYVPDATAEAPNPMPARLERAIDWLIAELGLDEAAARQI 700
              +P                                           E+GL E   R  
Sbjct: 580 HFESP-------------------------------------------EMGLVEPLLRVQ 596

Query: 701 VDYLARARAALGVLPTQDTLVMERFFDESGGTQLVV-----HAPFGSRVNRAWGLALRKR 755
           +D+ A        LPT+ TL+ E      G    +      H   G     AW L   + 
Sbjct: 597 MDWSA--------LPTETTLLAEVMKSREGWHLFLYPFAGRHVHLGLASLLAWRLGQHRP 648

Query: 756 F-----CRQFNFELQAAATEDAI--VLSLTGSHSFVLDEVWRYLHSNSAERLLIQALLDA 808
                    + FEL +A   D +  +     S   +L +V   L++    R         
Sbjct: 649 LTFSIAVNDYGFELLSATEVDWMHWLTPELFSEDNLLHDVLASLNAGELARR-------- 700

Query: 809 PLFGVRWRWNATTA-LGLPRYTGGRKTAPQLQRMRSEDLLTSVFPEQAACLENVVGEREL 867
                R+R  A  A L    Y G +K+A QLQ   S  L   VF +              
Sbjct: 701 -----RFREIARIAGLVFSGYPGAQKSARQLQ--ASSGLFFDVFRQYD------------ 741

Query: 868 PHHPLVDQTVDDCLHDAMDSERWLALLRRMENG--DVRLVARDLPAPSPLAAE 918
           P + L+ Q  ++ L   ++ ER    L+R++    D+  V R  P   PL  E
Sbjct: 742 PANLLLTQAEEEVLRQELEVERLQQTLQRLQQRQLDIHQVKRTTPLAFPLMVE 794