Pairwise Alignments

Query, 1544 a.a., ATP dependent helicase, Lhr family from Paraburkholderia bryophila 376MFSha3.1

Subject, 849 a.a., DNA damage response helicase, ligase-associated (from data) from Sinorhizobium meliloti 1021

 Score =  240 bits (612), Expect = 5e-67
 Identities = 253/891 (28%), Positives = 382/891 (42%), Gaps = 129/891 (14%)

Query: 56  WFLKSFPAPTDAQAAAWPQIRQGRSTLVAAPTGSGKTLTAFLSALDDLVQQGLANNGALP 115
           WF +    P   Q     +   G STL+ APTG+GKTL  FL +L D+ ++G    GA  
Sbjct: 26  WFAEKGWRPRAHQLELLSRAEAGESTLLIAPTGAGKTLAGFLPSLVDITRRGRIPPGAPF 85

Query: 116 DETLVVYVSPLKALSNDIRLNLQVPLQGIAAELDARGLPPLDIRTAVRTGDTTQQERNAL 175
                +Y+SPLKAL+ DI  NL  P+  +       GLP   +    RTGDT Q +R   
Sbjct: 86  TGIHTLYISPLKALAVDIERNLMKPVGEM-------GLP---VSIENRTGDTPQGKRQRQ 135

Query: 176 KKRAPHILVSTPESLYVLLGSDSGRRMLCTVRTVIVDEIHALAGSKRGSHLALSLERLDA 235
           K   P IL++TPE L +LL +    R    +R V++DE+H+L  SKRG  L+L L RL  
Sbjct: 136 KLNPPDILLTTPEQLALLLANGEAERFFKDLRYVVLDELHSLVMSKRGHLLSLGLARLRR 195

Query: 236 LCGRRLPRIGLSATQKPVSAVARFLVGGAPVDSDIPADCAIIDVGHIRERDLALEIPPVP 295
           L  R L  +GLSAT      + R+LV    +  +  A    +  G   E  +      VP
Sbjct: 196 LAPR-LQTMGLSATVADPMDLQRWLVAQF-LAKENHAGLITVSGGAKPEISILRTENQVP 253

Query: 296 LEAVMPNEVWERVYDRLAELVALHSTTLIFVNTRRMAERAARHLTERLGKDA-VAAHHGS 354
                       VY  + E    H TTL+FVNTR  AE   + L +    D  +A HHGS
Sbjct: 254 WAGHSARYAIPDVYAAIKE----HRTTLLFVNTRSQAEMLFQELWKINDDDLPIALHHGS 309

Query: 355 LAKEHRFDAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGH 414
           L    R   E  +    LR ++AT++L+LGID GDVDLV  +G+P+  +   QR+GR+ H
Sbjct: 310 LDVAQRRRVEAAMAENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIGRANH 369

Query: 415 HVGGMPKGRLFPTSRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSTEWS 474
            +    +  L P +R +++EC A LD    G  D   I +  LDVLAQ I+    +  + 
Sbjct: 370 RMDEPSRAILVPANRFEVMECQAALDANYVGAQDTPSIGKGALDVLAQHILGMACAQPFD 429

Query: 475 EDALFDLIRRAAPYAELAREQYDAVLRMLAE-GYTSRNGPRAAYIHRDVVSGTLRGRRGG 533
              L++ +  AAPYA LA E ++  + ++A  GY  R   R A I R    G    R   
Sbjct: 430 ALELYEEVISAAPYARLAWETFERAVDLVATGGYALRTYERYARI-RKTKDGL--WRVSN 486

Query: 534 KLVAV---TSGGTIPENADYAVVLEPQ---------AVNIGTVNEDFAVESLAGDVFQLG 581
            +VA     + GTI E+    + +  +          +++G V E F      GD F   
Sbjct: 487 PMVAQQYRLNVGTIVESPMLNIRMVKRNQRGSLGRGGMSLGKVEESFLEMLSPGDTFLFS 546

Query: 582 NASYRILRIESGRVRVEDAQGQPPNIPFWLGEAPGRSDELSFGVARLREQIARLLASGDD 641
               R   I      V  A    P +P + G   G+    ++  A++R+ +A        
Sbjct: 547 GKVLRFEGIRENECLVSQAFSFDPKVPSYAG---GKFPLSTYLAAQVRKMLA-------- 595

Query: 642 ATTPLDNAQASDTASKATASEYVPDATAEAPNPMPARLERAIDWLIAELGLDEAAARQIV 701
                      D A +A     +PD                                Q+ 
Sbjct: 596 -----------DPARRAG----LPD--------------------------------QVR 608

Query: 702 DYLARARAALGVLPTQDTLVMERFFDESGGTQLVVHAPFGSRVNRAWGLALRKRFCRQFN 761
           D+LA  +  + +LP  D L++E  F       +V++A  G   ++  G+ L +R  R   
Sbjct: 609 DWLA-LQGDVSMLPRDDELLIET-FPRGSRHYMVIYAFEGRLAHQTLGMLLTRRLDRAGL 666

Query: 762 FELQAAATEDAIVLSLTGSHSFVLDEVWRYLHSNSA-------ERLL---IQALLDAPLF 811
             L   AT+ ++ +       + LD++     + +        E +L   ++A L+    
Sbjct: 667 KPLGFVATDYSLAV-------WALDDMGAAFRARAPSLGQLFDEDMLGDDLEAWLNESFL 719

Query: 812 GVRWRWNATTALGL--PRYTGGRKTAPQLQRMRSEDLLTSVFPEQAACLENVVGERELPH 869
             R   N     GL   R+ G  KT  Q+    S DL+  V                 P 
Sbjct: 720 LKRTFRNCAVIAGLIEQRHPGREKTGRQI--TVSADLIYDVL------------RAHEPD 765

Query: 870 HPLVDQTVDDCLHDAMDSERWLALLRRMENGDVRLVARDLPAPSPLAAEIL 920
           H L++ T +D     +D  R  ++L+R++     +  R L   SPLA  ++
Sbjct: 766 HILLEATRNDAATGLLDIGRLGSMLKRIKG---HITHRRLDQISPLAIPVM 813