Pairwise Alignments

Query, 840 a.a., PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3) from Paraburkholderia bryophila 376MFSha3.1

Subject, 1390 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  272 bits (695), Expect = 1e-76
 Identities = 169/521 (32%), Positives = 263/521 (50%), Gaps = 20/521 (3%)

Query: 331  DITERFNARDL----DKRFRVLVDAISDYAITLLDADGFITTWSAGSVHVMGYHADEVIG 386
            DIT+R  A +     +   R L  +   YAI  LD DG ITTW+ G+  + GY   E IG
Sbjct: 871  DITDRRRAEERLEAGEAHMRRLAQSTKGYAIITLDVDGIITTWNRGAQTLFGYDEQEAIG 930

Query: 387  KPHSLFYTPEDVSVGRPQKDLDQAAREGRSEMEEWRVRKNGTNFWANTIVTALRDPNGAL 446
            +   + YT +D   G P+ +   A   G++  E W +R++G+  + + +V  L D  G +
Sbjct: 931  QCIDMLYTEQDRQAGVPETERKHALEHGQASDERWHLRRDGSQRFFSGLVNPLVDSEGKV 990

Query: 447  QGFAKITRDMSRRRR--------MEELEASSQRMSQFLGLLGHELRNPLAPLRNAVSMLQ 498
             G AKI RD++  R+        +E ++A++ +  QF  +L HEL++PL  ++    +L 
Sbjct: 991  IGLAKIARDLTEERKQSSEQQNELETIQAANLQKDQFFAVLSHELKHPLNLIQLNTDLLA 1050

Query: 499  LK--SKGHEAFLPEHELIDRQLSHLTRLVDDLLDAGRVTLGRVHITPTPCALQAVVQLSI 556
                +K   +     + I   +   +R++DDL+D  R+  G++ +       Q V++   
Sbjct: 1051 RSPAAKTSPSLRKATQAIQNAVRSQSRIIDDLMDVSRIRTGKLKLHFATLRYQDVLRGIE 1110

Query: 557  EGSAPLLAARNQTLNVSMPDEPMRVNGDLTRLVQVVQNLLNNASKFSPIGASIDLTVFRS 616
                PL  A N       PDEP+ +  D TRL Q++ NLLNNA KF+  G  I + + R 
Sbjct: 1111 AVFEPLAQAENVVFEAFKPDEPIYIQADPTRLDQIIWNLLNNAWKFTKGGERICMQLKRD 1170

Query: 617  ARLLAIRIDDPGRGIEPDAIDAMFNLFVQETPTEEQADKSGLGIGLTLARAIVDLHGGHI 676
                 + + D G+GI  D +  +F++F Q      Q  K GLGIGL L + +V+ H GHI
Sbjct: 1171 GDQARLDVIDTGQGISADFLPKVFDMFGQAEMHHAQRTKHGLGIGLALVKQLVEAHNGHI 1230

Query: 677  DARSAGRGKGSSFTVWLPGYESEVADEETRENPPVAPPQANLRVLVVDDNNDSADSMAAL 736
            +A S G G+G+ F+VWLP +     +    +N         +R+L+VDD+ D  ++M  L
Sbjct: 1231 EAYSEGIGRGARFSVWLPIHLQTEMELNELQNGAELGGLTGIRILLVDDSPDILETMCEL 1290

Query: 737  VEVLGHESRAVYDGAAAVELAKQWQPALVLLDLSMPKITGFDALPQIR---AALHEPGAV 793
            +E  G        GA  +ELA+Q    +++ D+ MP   G   +  IR   A +H P   
Sbjct: 1291 LESEGANVTTADGGAQGIELAEQTPFDVIVSDIGMPDTDGHKMMSIIRNHGANMHTPS-- 1348

Query: 794  IAAMTGLGTSEDRARTAAAGFDLHLTKPVGLDDLEDVLRLA 834
              A+TG GT  D  +  AAGF LHL KP+ L  L D +  A
Sbjct: 1349 -IALTGYGTLSDVEKARAAGFTLHLRKPIDLQALIDAVTQA 1388



 Score = 45.8 bits (107), Expect = 2e-08
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 207  REAADKRL-ASSLRRRRLVLDTTHDAFICTDSNGIIIDWNDAANRTFGYSRDAVIGQPML 265
            R  A++RL A     RRL   T   A I  D +GII  WN  A   FGY     IGQ  +
Sbjct: 875  RRRAEERLEAGEAHMRRLAQSTKGYAIITLDVDGIITTWNRGAQTLFGYDEQEAIGQ-CI 933

Query: 266  SLLFPERCKAEYAQLDIFEFDRKQPGHSPRT--ELTAARSDGSE-FPAELSVAAVQYDGS 322
             +L+ E+ +    Q  + E +RK      +   E    R DGS+ F + L    V  +G 
Sbjct: 934  DMLYTEQDR----QAGVPETERKHALEHGQASDERWHLRRDGSQRFFSGLVNPLVDSEGK 989

Query: 323  K-ELAYFVRDITE 334
               LA   RD+TE
Sbjct: 990  VIGLAKIARDLTE 1002