Pairwise Alignments

Query, 1062 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

Subject, 1048 a.a., multidrug resistance protein from Marinobacter adhaerens HP15

 Score =  389 bits (1000), Expect = e-112
 Identities = 298/1070 (27%), Positives = 516/1070 (48%), Gaps = 48/1070 (4%)

Query: 1    MWIVNVALKRPYTFIVMAILIVLATPFVLFTTPVDVLPEINIPVVSIIWTYNGLSAEDMA 60
            M + +V++KRP    V+++LIV+     L   PV   P+I+ PVVSI   Y G +AE + 
Sbjct: 1    MVLSDVSIKRPVFATVLSLLIVVFGLAALMGLPVREYPDIDPPVVSISTDYTGAAAEVVD 60

Query: 61   HRIASVNERSLTTTVNDIEHIESQSLAGITILKVFLQPTANIQTAIAQTVAVEQAQLKQM 120
             +I  V E +++  +  I  IES +  G +   +      ++  A             Q+
Sbjct: 61   TQITQVIEGAISG-IEGIRSIESSTEQGESRTSIEFTTARDVDIAANDVRDAVSRVANQL 119

Query: 121  PPGATPPLVISYSASSIPVIQLGLSSTKLSEQQLNDTALNFLRPQLVTIPGAAVPYPYGG 180
            P  A PP+V    + + P++ + L S      +L+D A   L  +L  + G A     G 
Sbjct: 120  PDEADPPVVRKADSDARPMMWVTLRSDVWDSAELSDFADRVLADRLSVLDGVADVRIGGE 179

Query: 181  KSRLISVDLNTRALLSKGLTPLDVVSAFNAQNLILPTGTAKIGPKEYTINMNGSPATLEG 240
            +   I V L+   L ++ +T  +V  A  A N+ LP G+     + +T+   G  + +E 
Sbjct: 180  RRYAIRVWLDRERLAARDITVAEVERALRANNVELPAGSVDSSTRNFTVRAEGRLSNVEQ 239

Query: 241  LNDIPVRTVNGATTYLREVAHVRDGFSPQTNIVRENGHRGVLMSVLKNGSASTLSIVNTL 300
              ++ VR        L EVA+V+ G     + +R NG   + M +++   A+T+++ + +
Sbjct: 240  FRELVVRRDGNDLLRLGEVANVQMGVESDVSRLRANGQTAIGMGIIRQSKANTVAVSDAV 299

Query: 301  HGLLPAARAALPPDLKITALFDQSVFVKAAVQGVVREAVVAAALTAAMILLFLGNWRSTC 360
               L   R  LPP++ I   +D+S+F++A+++ VV    +A +L   +I LFL +WR+T 
Sbjct: 300  RAELEKIRETLPPEVTIAESYDESIFIRASIKEVVTTLAIAVSLVILVIFLFLRSWRATL 359

Query: 361  IIAISIPLSILSSLIALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHLHMGTNL 420
            I A++IP++++ + I L  LG +IN++TL  + LA+G++VDDA V +ENI+R +  G   
Sbjct: 360  IPAVTIPVAVIGAFIGLGFLGFSINVLTLLAVILAIGLVVDDAIVMLENIQRRIDEGEPP 419

Query: 421  HDAILEGAGEIAIPALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLASYVLSRT 480
              A   GA ++A   + +TL +  VFVP+ F+ G    LF      +  A++ S +++ T
Sbjct: 420  LLAAYRGAKQVAFAVIATTLTLVAVFVPISFMGGNIGRLFAEFGFTLAAAVVFSSLVALT 479

Query: 481  LVPTLAMLLMGHAHKPKADMKPSLFA---RLYRRFDNGFERMRAAYIVILSSLLVRRARF 537
            L P L    +   H P++     L+A   ++     NG+ R           LL    R 
Sbjct: 480  LAPMLCSKWL--RHSPESAEGHRLWAASEKVLNGLTNGYRR-----------LLEFSLRQ 526

Query: 538  GSIFLGFCVVSMGLAFV----LGEDFFPSVDAGNIRLHMRAPTGTRIEETARLADEVEKV 593
              + LG  +V + +A V    L ++  P+ D   I +   AP G+ +E T     +VE+ 
Sbjct: 527  PGLLLGLGLVGLVIAAVVYPKLPQELAPTEDRAVIIMPTSAPRGSTVEYTDHYVRQVEET 586

Query: 594  IREVVPEKELGTILDNLGLPYSGINLSYSNAGTIGTLDGEIQIALKEGHEPTQLYVDKLR 653
            +   + E     +L  +G      N ++   G +   D EI     +  E T     KL 
Sbjct: 587  LLPYLDEGIANRLLAIVGFRNEEDN-AFMIIGLVPWEDREI-----KQQEVTSEIRKKLA 640

Query: 654  AMLPQRFPGVEFFFQPADIVTQILNFGLPAAVDIQIAGADQQGNFDVARKLLKQVRMIPG 713
             +   R   V     P  +  +    G   AV+  +AG D +     +++++++ +  P 
Sbjct: 641  DVSGIRTVAV----NPPGLGQR----GFSQAVEFVVAGPDYESVQAWSQEIVERAKENPN 692

Query: 714  TVDTHIQQKLDEPAINLQMDRTRLQQLNLTASNVAQNVLISLSGSSQTSPGFWYNDRNGV 773
              D     +L  P + + +DR R   L++T  +V   +   L+    T+    Y DR G 
Sbjct: 693  LQDLDTDFELTRPELRVNIDRERAADLDITVEDVGLTLQTMLASRQVTT----YIDR-GR 747

Query: 774  EYNVAVQTPQYSISSIDDLLRTPVSASATGPTQLLGNLVRVQPQNQFAVVTHYNIRPVID 833
            EY+V +Q    + ++ +DL +  +     G    L  LV VQ       +   +  P + 
Sbjct: 748  EYDVIIQAEDANRATPEDLGQIFLRPREGGNLIPLQALVSVQEIGANPDLRRIDRLPAVV 807

Query: 834  LYVSV-DKRDLGSVADQVDKLVEQARASLPRGSQITVRGQVQTMRSSYFGLGLGVAMAIV 892
            +  S+ D  DLGS    ++ L   A  +LP  ++++ +G  +  + S   + +  A+A V
Sbjct: 808  ISASLADGYDLGSALTYLNNL---AVDNLPPEARVSYKGLSREFQESSAAIYVTFALAFV 864

Query: 893  LVYLLIVVNFQSWVDPLIIVSALPAALAGIVWMLFLTGTHLSVPALTGAIMTMGVATANS 952
            +V+L++   F+SW+ PLII+ ++P A+ G +  L+ TG  L++ +  G IM +G+   N 
Sbjct: 865  IVFLVLAAQFESWIHPLIIMLSVPLAVTGALLALWWTGISLNIYSQIGIIMLLGLMAKNG 924

Query: 953  ILMVAFARQRLSAGAPPLTAALEAGASRIRPVLMTAFAMIIGMIPMALGLGEGAEQNAPL 1012
            IL+V FA Q    G     A LE    R RPVLMT  + I G +P+ +  G GAE  A +
Sbjct: 925  ILIVEFANQLRDKGYEVREAILEGACLRFRPVLMTTISTIFGAVPLVIATGAGAESRAAI 984

Query: 1013 GRAVIGGLLFATVSTLFFVPLVFAGIHTRLARRH---RNDHEESGNGDAG 1059
            G  ++GGL+FAT  TLF +P+++  +  R A+       + E   +G AG
Sbjct: 985  GMVILGGLIFATTLTLFIIPVLY-NLLARFAKSSNAVEKELERQASGQAG 1033