Pairwise Alignments

Query, 383 a.a., amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) from Paraburkholderia bryophila 376MFSha3.1

Subject, 394 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  239 bits (610), Expect = 1e-67
 Identities = 134/378 (35%), Positives = 204/378 (53%), Gaps = 12/378 (3%)

Query: 11  AIVMGLALAGAPCSYAATP----------VDVKIGFAAPLTGGQAHYGADFRSGVQLAIE 60
           A ++ LA  GAP    A P            + IGFA PL+G     G   ++GVQLA+ 
Sbjct: 9   AALLALATLGAPVGATAQPRAPLPDRQETATLAIGFAGPLSGPSGGVGKSMQNGVQLALA 68

Query: 61  DMNGTNPVIGGKPVHFVLDAQDDQADPRTGTTVAQKLVDDGVVAVIGHYNSGTSIPAAPI 120
           + N     IGGK     L AQDD+ADP T   VA+ LV   V+AV+GH+ SGTS+ AAP+
Sbjct: 69  EANRRGLRIGGKSWQLRLIAQDDRADPATAEFVARSLVQQQVIAVVGHWTSGTSLAAAPV 128

Query: 121 YAKAGTPQVA-MATAPSYTRLGLPTTFRLLTSDTQLGAVLGDFAVKGLKFKRLAIVDDRT 179
           Y +AG  QV   A +   T +  P  FR + ++  LG +   +AV  L+ + +  +DDRT
Sbjct: 129 YHRAGVIQVTPSAMSRRLTAMSYPRIFRTIPNNESLGRLAAGYAVDKLETRTIVTIDDRT 188

Query: 180 AYGQGVAEEFAKAAKAAGATVVTEEYTNDKAVDFRAILTKIKQANVDAVFYGGADTQAAP 239
            +GQG+AE+FA+ A   GA VV     +DK  DF A L + ++   D +F+GG D QA  
Sbjct: 189 PFGQGLAEQFARTASERGAQVVGRYSVSDKTSDFNAALLEARKLQPDLIFFGGLDWQAGV 248

Query: 240 MLKQMRSLAIKSTLLGPDMLQSDNLIKIAGEASEGTLAASEGSPLSQMPGGKAFAERYQK 299
           + K +R L + + L+          +  AG  + G L    G P  +MPG K+F +RY +
Sbjct: 249 LAKSIRRLKLHARLMASPGTLGLPFLMRAGPDANGALVLEPGPPQDKMPGWKSFRQRYSE 308

Query: 300 RFNQPVELYAPYAYDGTMAVFNAMKKADSTDPHVFLSALKATNMKGVTTSELSYDQYGDL 359
            F+  ++LYA +AY+   A+   +++A S DP     A+     +GV +  +++++ GDL
Sbjct: 309 NFDSDMDLYAVFAYEAAQAIIQGIRQAGSADPERIAEAMHRLRFEGV-SGPVAFNEEGDL 367

Query: 360 KYGGVTVYKVVNGTWKPL 377
                T+Y+V +  W+P+
Sbjct: 368 LQPSFTMYEVKDQRWQPV 385