Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family from Paraburkholderia bryophila 376MFSha3.1

Subject, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (393), Expect = 8e-43
 Identities = 93/288 (32%), Positives = 150/288 (52%), Gaps = 7/288 (2%)

Query: 2   LNYRHLYYFWIVVKEGGFARAAERLDMAVQTISAQVRELEKSIGRQLLKPAGRGVAMTEA 61
           LNY HLYYFW+V K+G   +AA+ L +  QT++ Q++ LE  +  +L K  GR +  TE 
Sbjct: 4   LNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEPTEL 63

Query: 62  GESAFSRAEQIFQLGEALLDDMREAGGEGVARLAVGLSDGISK-LAAHALLAPVLGTPSL 120
           G+  F  A+++F L   +LD +  +    +    VG++D +SK L +  LL  V G   +
Sbjct: 64  GQLVFKYADRMFGLSYEMLDIVNYSQRSNLL-FDVGVADALSKRLVSKILLTSVPGDNRI 122

Query: 121 RLLCHEGEHAQLLSELALHRLDLVLACQPAPHNSDLRVVSQRLAGSPVDWYGPADIARKS 180
            L C E  H  LL +LA H+LD++L+  P   +    + S++L  S + ++   D+    
Sbjct: 123 HLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDV---- 178

Query: 181 ARAGFPQCLADLPVLLPTRHGALRGRLDRWFDSQGIRPRVVGEFEDSALMAVFAA-RGLG 239
             A FP  L    +L+P    A+  ++ +WFD QG++P ++GEF+DSALM  FA      
Sbjct: 179 DFAPFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSDA 238

Query: 240 VFPLAELGAEDLSLLRGLRWLGRADGVIDEIHAIRSRRGQHHALASQV 287
           VF        ++     L+ +G  D + +E + I + R   H     V
Sbjct: 239 VFMAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNV 286