Pairwise Alignments

Query, 438 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Paraburkholderia bryophila 376MFSha3.1

Subject, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  181 bits (459), Expect = 3e-50
 Identities = 125/344 (36%), Positives = 185/344 (53%), Gaps = 42/344 (12%)

Query: 45  VTIGGDAPVRVQSMTNTDTADAIGTAIQIKELAQAGSELVRITVNTPEAAAAVPAVREQL 104
           V IG  AP+ VQSMTNT T D   T  QI+ L   G+++VR++V T +AA A   +++Q 
Sbjct: 20  VPIGDGAPIAVQSMTNTRTTDVAATVAQIRALENVGADIVRVSVPTMDAAEAFRQIKQQ- 78

Query: 105 DRMGVSVPLVGDFHYNGHLLLRDYPACAESLSKYRINPGNVGHGAKRDTQFAQMIEAAAK 164
               V VPLV D H++  + L+      + L   RINPGN+G+    + +   +++ A  
Sbjct: 79  ----VKVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIGN----EERIRAVVDCARD 127

Query: 165 YDKPVRIGVNWGSLDQDLLAKMMDENAARATPWEAQSVMYEALIQSAIGSAERAVELGLS 224
            + P+RIGVN GSL++DL+ K  +      TP        EAL++SA+   +    L   
Sbjct: 128 KNIPIRIGVNGGSLEKDLMDKYKEP-----TP--------EALLESAMRHVDILDRLNFD 174

Query: 225 RNKIILSCKVSGVQDLIAVYRELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGI 284
           + K+  S K S V   +  YR LA++    LHLG+TEAG    G V S   L +LL +GI
Sbjct: 175 QFKV--SVKASDVFLAVESYRLLAKQIKQPLHLGITEAGGARAGAVKSAVGLGMLLAEGI 232

Query: 285 GDTIRISLTPEPGASRTGEVIVGQEILQTMGLRSFTPMVIACPGCGRTTSTLFQELASQI 344
           GDT+RISL  +P      EV VG +IL+++ +RS     IACP C R           Q 
Sbjct: 233 GDTLRISLAADP----VEEVKVGFDILKSLRIRSRGINFIACPSCSR-----------QE 277

Query: 345 QTYLRTQMPVWRDQYPGVEKMHVAVMGCIVNGPGESKQANIGIS 388
              + T   + R        M V+++GC+VNGPGE+  +++G++
Sbjct: 278 FDVISTVNELERRLEDVTTAMDVSIIGCVVNGPGEALVSHLGLA 321