Pairwise Alignments

Query, 597 a.a., ATP-binding cassette, subfamily B, MsbA from Paraburkholderia bryophila 376MFSha3.1

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  463 bits (1191), Expect = e-134
 Identities = 239/572 (41%), Positives = 367/572 (64%), Gaps = 6/572 (1%)

Query: 23  FRRLWPFIKPLLWVIVGAIVAMAVSAGTDAAIPALLKPLLDKGFGAHASDNAKWFVPAAV 82
           F+RLW +I+     +V + +A+ ++A  D  + +LLKPLLD+GFG +A  N    +P  +
Sbjct: 13  FKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFG-NAESNFLRILPFMI 71

Query: 83  IGLALIRGVSQYASGYLLAYVSNKILLELRLRMFDRMIHTSVAFFQRETASTVINAIVFE 142
           +GL  +RG+S +AS Y L++VS  +++++R R+F+  +H  V FF +E+   +++ I ++
Sbjct: 72  LGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYD 131

Query: 143 VNQILNVLLGVMVTLVRDSLTVIFLLGYLFYLNWRLTLIVAVLLPGIGWLVGKINRRLRR 202
             Q+       +V++VR+  ++I LL  +F+ +W+L+L++ V+ P + + +  +++R R+
Sbjct: 132 SEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRK 191

Query: 203 LNREHQLLTNELSYIVEETVGGYKVVKVHNGEKYEMDRFTSMSKRLRGYAMRMTVSGGLA 262
           ++R  Q     ++   E+ + G+KVV  + G++ E  RF  +S  +R   M++  +  +A
Sbjct: 192 ISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIA 251

Query: 263 QPLTQFLASIALAVVITIAVVQSSSDQTTVGGFVAFVTSMLLIISPLKHLMDVNQPLQRG 322
            P+ Q +AS+AL  V+ +A V S   + T G F    ++M  ++ PLK L  V    QRG
Sbjct: 252 DPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRG 311

Query: 323 MTAAELIFGLIDEPAEPAGGGKPLERARGEVEFRNVSFMYSTNATHNRHTLDHVSFKVAP 382
           M A + +FGL+D   E   G    ER  GEV+ ++V+F Y       +  L HVSF +  
Sbjct: 312 MAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGK---EKPALSHVSFSIPQ 368

Query: 383 GEMVALAGPSGSGKTTLVNLLPRFFDPTGGEILVDGVPIGDYDLHALRSQIAMVSQDVVL 442
           G+ VAL G SGSGK+T+ NL  RF+D   G I +DG  + DY L  LR   A+VSQ+V L
Sbjct: 369 GKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHL 428

Query: 443 FNDTVANNVAYGQTAD--RDKVNAALRAANLWDTVEAMPNGIDTLVGDNGMMLSGGQRQR 500
           FNDT+ANN+AY    +  R+++  A R A+  + +E MP G+DT++G+NG  LSGGQRQR
Sbjct: 429 FNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQR 488

Query: 501 LAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERANRI 560
           +AIARA+ +DAP+LILDEATSALD+ESER +QAAL+ L K +T LVIAHRLSTIE+A+ I
Sbjct: 489 VAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEI 548

Query: 561 LVMEAGRIAESGSHRELLAQNGLYAHLHRIQF 592
           LV++ G I E G H +LLAQ+G YA LHRIQF
Sbjct: 549 LVVDEGEIIERGRHADLLAQDGAYAQLHRIQF 580