Pairwise Alignments

Query, 597 a.a., ATP-binding cassette, subfamily B, MsbA from Paraburkholderia bryophila 376MFSha3.1

Subject, 605 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  347 bits (889), Expect = 1e-99
 Identities = 208/587 (35%), Positives = 330/587 (56%), Gaps = 12/587 (2%)

Query: 8   SKPIGEGEASSPAVVFRRLWPFIKPLL---WVIVG-AIVAMAVSAGTDAAIPALLKPLLD 63
           ++  GE EA+ P+ + R +   IK  L   W ++  A++ M   A + +AI  L+KP ++
Sbjct: 6   AREAGEAEAAGPSTL-RLVGRLIKDHLAQQWGLIALAVLCMLAVAASTSAIAWLMKPAVN 64

Query: 64  KGFGAHASDNAKWFVPAAVIGLALIRGVSQYASGYLLAYVSNKILLELRLRMFDRMIHTS 123
             F  H  D       A  +   L +G++ Y    L+  V  +++   R  ++D +    
Sbjct: 65  DVFARHDRDVLMLIALAFPVAFVL-KGLANYGQRTLMNRVGLRVVQRCREALYDHLQGMD 123

Query: 124 VAFFQRETASTVINAIVFEVNQILNVLLGVMVTLVRDSLTVIFLLGYLFYLNWRLTLIVA 183
           +AFF ++  + +++    ++  + N +   ++ + RD++T++ L+  LF L+  L LI  
Sbjct: 124 IAFFAQQQTAALVSRFTVDLTLLKNTITSGIMVVGRDAVTMVSLVVSLFLLDIELALIAV 183

Query: 184 VLLPGIGWLVGKINRRLRRLNREHQLLTNELSYIVEETVGGYKVVKVHNGEKYEMDRFTS 243
            + P     +  + +R+R+  R  Q  + +L  ++ +     +VVKV+N  ++E  R  +
Sbjct: 184 TVFPAAVLPIALLGKRVRKAARGMQAQSGQLDALLLQVFQAIRVVKVYNAGEHERARVAA 243

Query: 244 MSKRLRGYAMRMTVSGGLAQPLTQFLASIALAVVITIAVVQSSSDQTTVGGFVAFVTSML 303
              R+  + MR    G     + + L+  A A V+     + ++     G F AF+TS+ 
Sbjct: 244 TVDRIYRHLMRSERIGAAISMVVEILSGFAFAAVVIYGGQRVTAGDLDPGTFFAFITSLF 303

Query: 304 LIISPLKHLMDVNQPLQRGMTAAELIFGLIDEPAEPAGG--GKPLERARGEVEFRNVSFM 361
           L+  P+K +  VN   Q GM A E ++G+ID P     G     L    GE+ F +V   
Sbjct: 304 LLYQPIKRIGGVNVVAQEGMAAVERMYGVIDTPPALREGKDAPALVVGGGEIVFDDVRLT 363

Query: 362 YSTNATHNRHTLDHVSFKVAPGEMVALAGPSGSGKTTLVNLLPRFFDPTGGEILVDGVPI 421
           Y T        LD +SF+   G  VAL G SG+GK+T + L+PRF+D  GG +L+DG  +
Sbjct: 364 YPTQ---EGPALDGLSFRAPAGATVALVGRSGAGKSTALQLVPRFYDADGGRVLIDGQDV 420

Query: 422 GDYDLHALRSQIAMVSQDVVLFNDTVANNVAYGQT-ADRDKVNAALRAANLWDTVEAMPN 480
                 +L + IAMV+Q+++LF+D+V  N+AYG+  A + ++  A R A   D + A+P 
Sbjct: 421 RAVTFRSLWAAIAMVTQEIILFDDSVRANIAYGRPGASQAEIEDAARHAAAHDFILALPE 480

Query: 481 GIDTLVGDNGMMLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMK 540
           G DT++G+ G  LSGGQRQRL IARA+ K+APIL+LDEATSALD+ESERHV+ A E L +
Sbjct: 481 GYDTVIGEQGTRLSGGQRQRLVIARAMLKNAPILLLDEATSALDTESERHVRQAFERLRQ 540

Query: 541 GRTTLVIAHRLSTIERANRILVMEAGRIAESGSHRELLAQNGLYAHL 587
           GRT +V+AHRLST+  A+ I V++AGRI ESGSH  LLA+ GLYA L
Sbjct: 541 GRTCIVVAHRLSTVMNADIIHVIDAGRIVESGSHAALLAEGGLYADL 587