Pairwise Alignments

Query, 597 a.a., ATP-binding cassette, subfamily B, MsbA from Paraburkholderia bryophila 376MFSha3.1

Subject, 592 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA from Marinobacter adhaerens HP15

 Score =  449 bits (1154), Expect = e-130
 Identities = 237/597 (39%), Positives = 374/597 (62%), Gaps = 18/597 (3%)

Query: 9   KPIGEGEASSPA---VVFRRLWPFIKPLLWV----IVGAIVAMAVSAGTDAAIPALLKPL 61
           +P+ +  A  PA     ++RL  ++KP L      ++G I+  A S G  AA+  ++  +
Sbjct: 5   EPLPDPAAGLPAGSWETYKRLLAYVKPFLLAFSLAVLGNIIYAAASTGMAAAMEYVIAAI 64

Query: 62  LDKGFGAHASDNAKWFVPAAVIGLALIRGVSQYASGYLLAYVSNKILLELRLRMFDRMIH 121
                  + ++  +  +   ++G+   RG+  + S Y ++YV  +++  LR  +FDR++ 
Sbjct: 65  ------ENPTEQNRLMLTMVIVGVFAFRGLGTFLSQYFISYVGRQVINALRNDVFDRLMT 118

Query: 122 TSVAFFQRETASTVINAIVFEVNQILNVLLGVMVTLVRDSLTVIFLLGYLFYLNWRLTLI 181
               +F    A  +++ + F V Q+       +   +R+ LT++ LLGY+FY NW+LTLI
Sbjct: 119 LPSRYFDDNAAGRLVSKLTFNVEQVAEATTNAVTITLREGLTIVGLLGYMFYTNWKLTLI 178

Query: 182 VAVLLPGIGWLVGKINRRLRRLNREHQLLTNELSYIVEETVGGYKVVKVHNGEKYEMDRF 241
              + P I  +V   ++R R++++  Q    +++++  E++ GY+VV+   GE YE  RF
Sbjct: 179 FLAVGPLIAAVVSYASKRFRKISKRIQGSMGDITHVASESITGYRVVRTFGGEDYERQRF 238

Query: 242 TSMSKRLRGYAMRMTVSGGLAQPLTQFLASIALAVVITIAVVQSSSDQTTVGGFVAFVTS 301
             ++ +    +++M  +  ++ P+ Q L +IA+A ++ + +      + + G  VAF+T+
Sbjct: 239 QEVNDKNLKQSLKMASTQAISVPVIQVLVAIAIAGLVWMMLAPEIRGEMSTGQLVAFITA 298

Query: 302 MLLIISPLKHLMDVNQPLQRGMTAAELIFGLIDEPAEPAGGGKPLERARGEVEFRNVSFM 361
              +  P++ +  V+  +Q+G+ AA  +F  IDE  E   G    +R  G++EF  V+F 
Sbjct: 299 ATTMAKPIRQVTSVHAKIQKGVAAAYDVFETIDESPEQDPGTYSPDRVEGDIEFDEVAFR 358

Query: 362 YSTNATHNRHTLDHVSFKVAPGEMVALAGPSGSGKTTLVNLLPRFFDPTGGEILVDGVPI 421
           Y     +    L+ +S  +  G+ VAL G SGSGK+TLV+LLPRF++ TGG+I +DG  +
Sbjct: 359 YRDQLDN---VLEGISLSIPAGQSVALVGRSGSGKSTLVSLLPRFYEYTGGDIRIDGHSL 415

Query: 422 GDYDLHALRSQIAMVSQDVVLFNDTVANNVAYGQTAD--RDKVNAALRAANLWDTVEAMP 479
            D+ L ALR QIA+V+Q+VVLFNDT+A N+AYG   D   +++  A   A+  + ++ MP
Sbjct: 416 RDFSLKALRKQIALVTQNVVLFNDTIAANIAYGALRDCTPEEIREAAAKAHALEFIDRMP 475

Query: 480 NGIDTLVGDNGMMLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLM 539
            G+DT++GDNG+MLSGGQRQRLAIARA+ K+APILILDEATSALD+ESERH+Q ALET+M
Sbjct: 476 EGLDTMIGDNGVMLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQEALETVM 535

Query: 540 KGRTTLVIAHRLSTIERANRILVMEAGRIAESGSHRELLAQNGLYAHLHRIQFQQSA 596
           +GRTTLVIAHRLSTIE+A+RILVM+ GRIAESG H ELLA  G YA LH++QF + +
Sbjct: 536 QGRTTLVIAHRLSTIEKADRILVMDNGRIAESGRHDELLAAGGAYAQLHQMQFSEQS 592