Pairwise Alignments

Query, 373 a.a., Outer membrane protein (porin) from Paraburkholderia bryophila 376MFSha3.1

Subject, 369 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  119 bits (299), Expect = 1e-31
 Identities = 112/388 (28%), Positives = 186/388 (47%), Gaps = 40/388 (10%)

Query: 3   KALLAAALMSAGVVAHAQSSVTLYGRLDAGIEYISGLPNANYTGSTSRWRAESGDWGT-S 61
           KA++AA L  +  ++ AQS VTLYG +D G+EY+S + N    G     R  +    T S
Sbjct: 5   KAIIAALLTMSATLSQAQS-VTLYGIIDTGVEYVSNVSNVG-AGQQGLLRVPNLTATTPS 62

Query: 62  LWGMKGVEDIGGGNKVLFQLEGSFNTMTGAGPGGGGLFNRWATVGLSNNTYGTFTMGRM- 120
             G++G ED+GGG + +F LE  F   +GA   GG +F R A VGLS++ +G  + GR  
Sbjct: 63  RIGLRGSEDLGGGLRSVFMLESGFAPDSGALNQGGRMFGRIAYVGLSDH-WGQVSFGRQA 121

Query: 121 LFISNGVWDFDPFGQSNWSSASLVRGRNWPQSSNNLAYQSPKFYGFDVYGQYALSNAT-- 178
             +     D D  G + + + +L   R   ++ N++AY+   F  F + G Y+    T  
Sbjct: 122 TMLLWATLDSDILGANVYGANALDNYRPNARADNSIAYRG-SFGAFTLGGTYSFGRDTVN 180

Query: 179 -NWNGNGTTPQGREAG---------LQLTYTSSLFQVRGIYDEIR---NSANGNFTDPFT 225
              N  GT   G +AG         L + Y ++ +     YD +R    +A G  +   +
Sbjct: 181 AGQNPAGTNCAGEQAGDSLACREWSLMVKYDTAAWGASLAYDTLRGGKGAAAGLSSSQLS 240

Query: 226 ASREYTAAFNVFLGQFKIQGAYQAVRTSAAASAAGTSPTSLDHEWGGVTWQATPAAALIA 285
            SR    A+ +   + K+ G   ++R +      G++ +     + G+++  TP   L  
Sbjct: 241 DSRMLLGAY-IKADRLKV-GIGGSLRHN-----QGSALSKSQLYYAGLSYDLTPTLNLAG 293

Query: 286 AVYHVNANKNGGNATIYTIGGSYNLSKRTLLDIQVATARNSKTANFGLDANAAGPGGNIT 345
            +Y+++ + +   A +  +  +Y+LS RT L +      N   +N  + A     GG++ 
Sbjct: 294 QLYYLHYDDSANKAWLGALRATYSLSARTALYLTGGFIDNRGQSNLSVSA-----GGSV- 347

Query: 346 SGGTTTYNENPLPGHSQTGVYAGIQHSF 373
             GT     NP PG +Q G+ AGI+HSF
Sbjct: 348 --GTA----NPAPGGNQFGMMAGIRHSF 369