Pairwise Alignments

Query, 772 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 816 a.a., conjugal transfer protein TraG from Pedobacter sp. GW460-11-11-14-LB5

 Score =  349 bits (895), Expect = e-100
 Identities = 241/760 (31%), Positives = 385/760 (50%), Gaps = 61/760 (8%)

Query: 7   ILHKQDIFITEKYEPDSRKDDLSFLSRSFERHFNERPYLHHTCYLFLTKTTRERSRQQSN 66
           I+ KQD+FI ++Y+  + K    FL + +  HF+ R +     Y  +T+  + ++     
Sbjct: 71  IIQKQDVFIRKQYKGRAEK---GFLQKKYHEHFSGREFTELRTYFVVTRQVKRKAFYTY- 126

Query: 67  WNTLCRGFLVPKEIRDKETVERFMEAVGQFESIVNDSGLVRLERLTTEEITGTENEPGII 126
                          DK+ +  F   + +   +   +GL  +    TE           I
Sbjct: 127 ---------------DKKILADFAHCIEKLFDLFTGAGLRPIYLEETE-----------I 160

Query: 127 ERYLTLS-----ADGTTMLQDMQLNPDEMRIGDKRLCLHTLSDLD--DLPGKVRTDGRYE 179
             Y+T       A  +  L +++ + +++ IG + +   +L + D  DLP KV      +
Sbjct: 161 NHYVTRILGMEFASPSLALDNLRCSDEQLFIGPRAVKCISLINTDSIDLPEKVAPFTFRQ 220

Query: 180 RLSTDRSDCRLSYAAPVGVMLSCDHIYNQWIFIDDSNENLSRFEKMAKNMQSLSRYSRSN 239
            +   +     +      V      IYNQ I I      L +     K    +     +N
Sbjct: 221 DIKGVKDFPADNLTFLFNVPGYSSIIYNQLIEIPAQQMTLQKLTLKRKRHSGIP--DPAN 278

Query: 240 QINKEWLDEYLNEAHSNGLQSVRCHCNIVAWAENGDELRRVKNDVGSALALMECTPHHNT 299
            +  E +D  L++   +    V  H +I+  A+  +++ +  N + ++L      P  N 
Sbjct: 279 LLCVEDIDRLLSDVARDNQLLVHAHYSIIVAADR-EKIGKAVNFIEASLFQQGIIPSRNA 337

Query: 300 TDLPALYWAGIPGNEADFPAEETFYTFTGQALCFFTAETCYRNSLSPFGIRMVDRLTGKP 359
            +   L+   +PGN  +    + F T    ALCFF  E+   +  S F +   DR  G P
Sbjct: 338 YNQLELFRCAMPGNGIELKKYDWFLTTADAALCFFFKESLITDDPSDFLLYFTDR-QGTP 396

Query: 360 VFLDISDLPMKKGVVTNRNKFILGPSGSGKSFFTNHLVRQYWEQGTHILLVDTGNSYKGL 419
           V +DISDLPM+ G + NRN+FILG SG+GKS+  N++V+QY      +++VD G+SY GL
Sbjct: 397 VAIDISDLPMQTGRLKNRNRFILGGSGTGKSYCVNNIVQQYLGYNMDVVIVDVGHSYSGL 456

Query: 420 CDLIHQKTGGDDGIYFTYKENDPISFNPFFTEDYQYDIEKRDSIKTLILTLWKREDEPPR 479
           C       G   G Y TY E  PI+ NPF  E+ +Y+IEK+D + TLI  LWK  D    
Sbjct: 457 C-------GTYGGKYITYSEEKPITMNPFSIEESEYNIEKKDFLITLICLLWKGADGSVS 509

Query: 480 RSEEVALSNAVSLYI-----EKIKKNRKIKPNFNSFYDFVRKDYRKVLADKNVREKDFDV 534
             E   ++  +S Y      + +    ++  +FNSFY+F  K   K+   K   +  FD+
Sbjct: 510 TIERDVIAQVISAYYGDYFGQPLPSVEQL--DFNSFYEFALK---KIPDIKQQEQIPFDL 564

Query: 535 DGFLNVLEPYYKNGEYGYLLNSDKELDLLNKRFIVFELDVVKDNPILFPVVTIIIMETFI 594
           + F  VL+ +Y+ GE+  +LN   +  L ++ FIV+E+D V++N +LFP+VT+IIM+ FI
Sbjct: 565 EEFRFVLKKFYRGGEFDTILNDAADQSLFSEPFIVYEIDAVQENKVLFPIVTLIIMDLFI 624

Query: 595 NKMRRLQGIRKMILIEEAWKAIAKEGMANYIRYLFKTVRKFYGEAVVVTQEVDDIISSPV 654
            KMR     RK +++EEAW+AI+   M++++ YL KTVRKF+GE + VTQEV DI+ +P+
Sbjct: 625 QKMRHRTSRRKALILEEAWRAISSPLMSHFLLYLNKTVRKFWGEIIEVTQEVGDIMGNPI 684

Query: 655 VKETIINNSDCKILLDQRKYQNKFDQIQNLLGLTDKERSQILSIN-LANAANRLYKEVWI 713
           +K++IINNSD  ILL Q++   +  ++  LL ++D E  +IL+IN L N   R     + 
Sbjct: 685 IKDSIINNSDTVILLQQKEADLR--KVAELLSISDIELRKILTINRLDNREGRSRFNEFY 742

Query: 714 GLGGTQSAVYATEVSAEEYLCYTTEETEKLELTRLTEKLG 753
              GT   VY  EVS   +L +TTE+ EK  L    E+LG
Sbjct: 743 IRRGTVGEVYGVEVSMYHHLAFTTEKPEKNALETYVERLG 782