Pairwise Alignments

Query, 407 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 386 a.a., site-specific integrase from Phocaeicola vulgatus CL09T03C04

 Score =  116 bits (290), Expect = 1e-30
 Identities = 97/398 (24%), Positives = 181/398 (45%), Gaps = 35/398 (8%)

Query: 11  YIRRTKLNRNGEAPIMMRITVNGVRVDASVKKTILPEFWSAAKGKALEKKREYKELNLYL 70
           Y R+  LN  G A + +   +N  +V  S    + PE W   K K ++       LN  L
Sbjct: 10  YNRKKSLNDRGTALVQVEAYLNKKKVYFSTHVYLRPEQWDV-KRKIIKDHPNQDALNGML 68

Query: 71  DSIRLRIMKIQRELEIEEVSVSANSVLDRFLGKDAPVQRTLFEVFREHNDKCVQLSGTDM 130
           +   + + K +  L  +  +++ + + + F         +     R+      ++  + +
Sbjct: 69  NEFIIELEKKELSLWRQGKTITLSLIKEEFKSN---TDASFLGFARK------EIMSSQL 119

Query: 131 APATVQRYETSLKHTRDFVWETYHKKDVLLDEVSRQFIEDYEFWLKTEKKCCHNTATKYL 190
             +T + + T++   + F      K  +  ++++  F+ D+E +L  E     NT  K++
Sbjct: 120 KDSTKRNHLTTISLLQSF------KPTIEFEDLTYNFVTDFEKFLY-ESGYQTNTVAKHM 172

Query: 191 KNFKKIIRIALAKGWM--KNDPFLEIRFSLDKVEPDFLEDSEIQKLISKEIDIPR----L 244
           K+ K  +  A+ KG++   N  F   +  + + +  FL   E++KL  +E+ +      L
Sbjct: 173 KHLKSFVNAAINKGYIDPNNYAFRRYKIKMKEGKHVFLLPEEMKKL--EEVSLTGRNSCL 230

Query: 245 SQVRDIFVFCCFTGLAFSDIHGLRKEHIVEDSNGVRWIRKGRQKTKIMCNIPLMEI---- 300
               D F+FCC+TGL +SD   L +++IV+  +G  W+     KT     +PL  +    
Sbjct: 231 EHTLDAFLFCCYTGLRYSDFVNLNEKNIVK-MDGKLWLIFDSVKTGTEVKLPLNLLFEGK 289

Query: 301 PLKILEKYSTNEYCKKHGVLFPVLCNQKMNAYLKELADICGIKKTLTTHVGRHTFATFAL 360
            L +L+KY       K    F +  N  +N  L  +  +  I K  + H  RHT AT  +
Sbjct: 290 ALTLLQKYQG-----KWSSFFSIKNNSSVNKELIRIGKLAKISKHFSFHSARHTNATLLI 344

Query: 361 ANGVSIESVAKMLGHTNVQMTRHYARVLDRTVIREMSQ 398
             G +I +V K+LGH N+  T+ Y  V+  T+IR++ +
Sbjct: 345 YKGANITTVQKLLGHKNLATTQIYGEVMGSTIIRDLKK 382