Pairwise Alignments

Query, 325 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 375 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  115 bits (289), Expect = 1e-30
 Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 6/208 (2%)

Query: 122 KGDKATVELPDGTNVVLNSASQLSYLNNFGE-KVRRVQLNGEAYFKVAPDEKHAFIVQVG 180
           +G+   V LPDG+ V LN+ S L Y  +F   K RRV+L GE YF++  D  H FIV   
Sbjct: 168 RGETQAVVLPDGSKVWLNALSSLKYPASFASSKDRRVELTGEGYFEIEKDGAHPFIVSTD 227

Query: 181 DLEVKVLGTSFNVSAYEDAKDITVVLLEG--KVGIYTQETSRMMKPGDKIEYNKTTHQLV 238
             EV+VLGT FN+++Y D       LLEG  KV I     +++++PG   +     ++L 
Sbjct: 228 KQEVEVLGTHFNINSYTDEMATKTTLLEGSVKVSIRNGNGNKILEPGK--QSTLLNNKLT 285

Query: 239 ATQVHPNDYIEWTKGNIYFEKESLENIMKTLSRIYDVEIRFDSNKLPKEYFTGTIPS-GG 297
            + V  +D + W  G   F  E L +I+K +SR Y+VEI +    L  + F+G++     
Sbjct: 286 ISDVDVDDEVAWKDGFFVFSNEPLSDILKQVSRWYNVEIEYQDESLKTKKFSGSVSRYAK 345

Query: 298 IQNALNILMLTSPFYYEMDGSVIVLKEK 325
           +   L  L  T    +++    I+ + K
Sbjct: 346 VSQVLRKLEFTKSVVFKIKDQKIIAERK 373