Pairwise Alignments

Query, 325 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 337 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  123 bits (308), Expect = 7e-33
 Identities = 96/332 (28%), Positives = 145/332 (43%), Gaps = 17/332 (5%)

Query: 6   YKELIEKYFEGNIADTEIKELSDWIKNDRQLQNWWEQEFTKSDA-AIDPILRDKLFARIK 64
           + EL+ K   G I+  E  EL   +  +  L+  +E+  T  DA A++    D +F RIK
Sbjct: 6   FTELLGKQLAGEISPDESVELKSILAGNSSLRAEYERLQTYFDAEAVEDENIDLVFDRIK 65

Query: 65  EGTLKHTSPRTKGVRTLPMIPWRWVAAILLPVCIAFFTY-----YLIDSSQMTSAPFIVK 119
                         +  P   W  +AA+L         Y     +   + Q+     + K
Sbjct: 66  TQIKVSAESGLTFTKNKPYSIWFKIAAVLAIFIAGVLVYNRETIFFNKTDQLPLTQVLTK 125

Query: 120 ADKGDKATVELPDGTNVVLNSASQLSYLNNFGEKVRRVQLNGEAYFKVAPDEKHAFIVQV 179
           A   +  T+ L DG+ V +NS S L Y  +F    R V L+GEA+F V  D KH FIV  
Sbjct: 126 A--AEVKTLVLADGSTVKINSGSSLKYPEHFTADTRDVYLSGEAFFDVKKDPKHPFIVHT 183

Query: 180 GDLEVKVLGTSFNVSAYEDAKDITVVLLEGKVGIYTQETSR---MMKPGDKIEY---NKT 233
             L VKVLGT+F+V AY++       L+ GKV I  +  +    ++KP DK        +
Sbjct: 184 EQLAVKVLGTAFDVKAYQNDAFTETTLIRGKVSISLKNNTAQTFILKPNDKFTLAGGKAS 243

Query: 234 THQLVATQVHPNDYI---EWTKGNIYFEKESLENIMKTLSRIYDVEIRFDSNKLPKEYFT 290
             QL        D I    WT   + ++  S + + K   R Y ++I F   +L    FT
Sbjct: 244 MSQLTHFNGTGADRILETAWTNHELIYKNNSFDEVAKLFERWYGIKITFKEPELKSVRFT 303

Query: 291 GTIPSGGIQNALNILMLTSPFYYEMDGSVIVL 322
           G +    +  AL +L L   F Y + G  + +
Sbjct: 304 GHVDKETLPEALEVLKLIENFNYSIKGENVYI 335